Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 AC087499.6-201ENST00000411576 835 ntBASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 GAPDHP40-201ENST00000505218 1006 ntBASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 KRT8P44-201ENST00000441609 1350 ntBASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 AC123567.1-201ENST00000548294 1261 ntBASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 MIR3197-201ENST00000582241 73 ntBASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 BRI3BPP1-201ENST00000594224 787 ntBASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 AC093726.1-201ENST00000608064 963 ntBASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZIC4Q8N9L1 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms