Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAM1L1Q8N609 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TRAM1L1Q8N609 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAM1L1Q8N609 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAM1L1Q8N609 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
TRAM1L1Q8N609 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAM1L1Q8N609 AP006294.1-201ENST00000415407 339 ntBASIC15.41■□□□□ 0.06
TRAM1L1Q8N609 GAPDHP40-201ENST00000505218 1006 ntBASIC15.41■□□□□ 0.06
TRAM1L1Q8N609 AP005018.1-201ENST00000525475 301 ntBASIC15.41■□□□□ 0.06
TRAM1L1Q8N609 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAM1L1Q8N609 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAM1L1Q8N609 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAM1L1Q8N609 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAM1L1Q8N609 AC105233.6-201ENST00000642093 218 ntBASIC15.41■□□□□ 0.06
TRAM1L1Q8N609 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.41■□□□□ 0.06
TRAM1L1Q8N609 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAM1L1Q8N609 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
TRAM1L1Q8N609 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAM1L1Q8N609 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAM1L1Q8N609 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAM1L1Q8N609 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAM1L1Q8N609 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAM1L1Q8N609 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAM1L1Q8N609 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAM1L1Q8N609 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
TRAM1L1Q8N609 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAM1L1Q8N609 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAM1L1Q8N609 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAM1L1Q8N609 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAM1L1Q8N609 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 SSR4P1-203ENST00000599569 2260 ntBASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 RN7SL692P-201ENST00000464677 288 ntBASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 AC120045.2-201ENST00000567334 178 ntBASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 AC133539.2-201ENST00000604757 467 ntBASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 WFDC1-204ENST00000613603 549 ntBASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 AL645728.2-202ENST00000641679 227 ntBASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
TRAM1L1Q8N609 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAM1L1Q8N609 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAM1L1Q8N609 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
TRAM1L1Q8N609 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAM1L1Q8N609 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAM1L1Q8N609 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms