Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 AL844908.2-201ENST00000609461 460 ntBASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 AC018892.3-201ENST00000623986 2499 ntBASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 AC087499.5-201ENST00000452760 1342 ntBASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
C11orf42Q8N5U0 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 AZGP1P1-201ENST00000411909 902 ntBASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 AC241585.1-201ENST00000433527 519 ntBASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 AC004890.2-204ENST00000481968 304 ntBASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms