Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 KLF2P3-201ENST00000451977 1087 ntBASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 AC125807.1-201ENST00000483097 614 ntBASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 AC140878.1-201ENST00000565277 250 ntBASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 AC139530.3-201ENST00000620344 690 ntBASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 FES-204ENST00000414248 2327 ntTSL 2 BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
TTC9CQ8N5M4 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 Z97205.2-201ENST00000564697 1639 ntBASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 PPT1-215ENST00000641471 2368 ntBASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 BAD-202ENST00000394531 631 ntTSL 3 BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 TARDBPP1-201ENST00000442013 1203 ntBASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 AC069120.2-201ENST00000524091 540 ntBASIC12.41□□□□□ -0.42
TTC9CQ8N5M4 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms