Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 AL118558.3-201ENST00000607414 1079 ntBASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 AC008741.2-201ENST00000612792 3115 ntBASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 AC134407.2-201ENST00000625089 1978 ntBASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SYNPOQ8N3V7 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SYNPOQ8N3V7 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SYNPOQ8N3V7 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.85■□□□□ 0.13
SYNPOQ8N3V7 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.85■□□□□ 0.13
SYNPOQ8N3V7 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SYNPOQ8N3V7 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
SYNPOQ8N3V7 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SYNPOQ8N3V7 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.85■□□□□ 0.13
SYNPOQ8N3V7 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SYNPOQ8N3V7 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
SYNPOQ8N3V7 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SYNPOQ8N3V7 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
SYNPOQ8N3V7 AL607033.1-201ENST00000623900 1599 ntBASIC15.85■□□□□ 0.13
SYNPOQ8N3V7 MIR326-201ENST00000362220 95 ntBASIC15.85■□□□□ 0.13
SYNPOQ8N3V7 AC092506.1-202ENST00000401022 528 ntBASIC15.85■□□□□ 0.13
SYNPOQ8N3V7 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.85■□□□□ 0.13
SYNPOQ8N3V7 CD8B2-202ENST00000417670 633 ntBASIC15.85■□□□□ 0.13
SYNPOQ8N3V7 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.85■□□□□ 0.13
SYNPOQ8N3V7 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.85■□□□□ 0.13
SYNPOQ8N3V7 ARTN-209ENST00000479128 471 ntTSL 3 BASIC15.85■□□□□ 0.13
SYNPOQ8N3V7 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.85■□□□□ 0.13
SYNPOQ8N3V7 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.85■□□□□ 0.13
SYNPOQ8N3V7 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.85■□□□□ 0.13
SYNPOQ8N3V7 AC107373.2-201ENST00000607735 490 ntBASIC15.85■□□□□ 0.13
SYNPOQ8N3V7 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SYNPOQ8N3V7 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SYNPOQ8N3V7 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.85■□□□□ 0.13
SYNPOQ8N3V7 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
SYNPOQ8N3V7 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
SYNPOQ8N3V7 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.85■□□□□ 0.13
SYNPOQ8N3V7 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SYNPOQ8N3V7 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.85■□□□□ 0.13
SYNPOQ8N3V7 AHCYP2-201ENST00000430630 1300 ntBASIC15.85■□□□□ 0.13
SYNPOQ8N3V7 AC007950.2-201ENST00000615045 2347 ntBASIC15.85■□□□□ 0.13
SYNPOQ8N3V7 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SYNPOQ8N3V7 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SYNPOQ8N3V7 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.85■□□□□ 0.13
SYNPOQ8N3V7 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SYNPOQ8N3V7 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SYNPOQ8N3V7 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 BTBD6P1-201ENST00000412176 1267 ntBASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 CALR4P-201ENST00000431943 946 ntBASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 ZNF767P-206ENST00000513792 565 ntBASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 AP001582.1-201ENST00000525856 295 ntBASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms