Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SIX5Q8N196 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SIX5Q8N196 HNRNPA1P32-201ENST00000396326 963 ntBASIC16.05■□□□□ 0.16
SIX5Q8N196 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SIX5Q8N196 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.05■□□□□ 0.16
SIX5Q8N196 KRTAP10-13P-201ENST00000412914 571 ntBASIC16.05■□□□□ 0.16
SIX5Q8N196 HOMER2P2-201ENST00000451621 847 ntBASIC16.05■□□□□ 0.16
SIX5Q8N196 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SIX5Q8N196 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC16.05■□□□□ 0.16
SIX5Q8N196 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC16.05■□□□□ 0.16
SIX5Q8N196 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.05■□□□□ 0.16
SIX5Q8N196 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC16.05■□□□□ 0.16
SIX5Q8N196 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC16.05■□□□□ 0.16
SIX5Q8N196 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.05■□□□□ 0.16
SIX5Q8N196 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.05■□□□□ 0.16
SIX5Q8N196 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.05■□□□□ 0.16
SIX5Q8N196 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SIX5Q8N196 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SIX5Q8N196 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SIX5Q8N196 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SIX5Q8N196 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SIX5Q8N196 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SIX5Q8N196 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SIX5Q8N196 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.05■□□□□ 0.16
SIX5Q8N196 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.05■□□□□ 0.16
SIX5Q8N196 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
SIX5Q8N196 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.05■□□□□ 0.16
SIX5Q8N196 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SIX5Q8N196 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.05■□□□□ 0.16
SIX5Q8N196 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.05■□□□□ 0.16
SIX5Q8N196 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SIX5Q8N196 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SIX5Q8N196 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.05■□□□□ 0.16
SIX5Q8N196 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SIX5Q8N196 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SIX5Q8N196 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SIX5Q8N196 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SIX5Q8N196 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SIX5Q8N196 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.04■□□□□ 0.16
SIX5Q8N196 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SIX5Q8N196 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
SIX5Q8N196 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SIX5Q8N196 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SIX5Q8N196 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SIX5Q8N196 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.04■□□□□ 0.16
SIX5Q8N196 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SIX5Q8N196 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.04■□□□□ 0.16
SIX5Q8N196 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC16.04■□□□□ 0.16
SIX5Q8N196 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SIX5Q8N196 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SIX5Q8N196 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SIX5Q8N196 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SIX5Q8N196 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.04■□□□□ 0.16
SIX5Q8N196 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.04■□□□□ 0.16
SIX5Q8N196 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.04■□□□□ 0.16
SIX5Q8N196 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SIX5Q8N196 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.04■□□□□ 0.16
SIX5Q8N196 AC245100.5-201ENST00000452108 331 ntBASIC16.04■□□□□ 0.16
SIX5Q8N196 RPSAP36-202ENST00000494591 1261 ntBASIC16.04■□□□□ 0.16
SIX5Q8N196 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC16.04■□□□□ 0.16
SIX5Q8N196 U62317.3-201ENST00000608319 855 ntBASIC16.04■□□□□ 0.16
SIX5Q8N196 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SIX5Q8N196 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SIX5Q8N196 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SIX5Q8N196 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.04■□□□□ 0.16
SIX5Q8N196 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SIX5Q8N196 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SIX5Q8N196 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SIX5Q8N196 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SIX5Q8N196 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
SIX5Q8N196 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SIX5Q8N196 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SIX5Q8N196 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SIX5Q8N196 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SIX5Q8N196 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.04■□□□□ 0.16
SIX5Q8N196 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SIX5Q8N196 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SIX5Q8N196 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SIX5Q8N196 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.04■□□□□ 0.16
SIX5Q8N196 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SIX5Q8N196 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.04■□□□□ 0.16
SIX5Q8N196 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.04■□□□□ 0.16
SIX5Q8N196 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SIX5Q8N196 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SIX5Q8N196 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SIX5Q8N196 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIX5Q8N196 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SIX5Q8N196 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIX5Q8N196 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SIX5Q8N196 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIX5Q8N196 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIX5Q8N196 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIX5Q8N196 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIX5Q8N196 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIX5Q8N196 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIX5Q8N196 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.03■□□□□ 0.16
SIX5Q8N196 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIX5Q8N196 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIX5Q8N196 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SIX5Q8N196 MIR1202-201ENST00000408529 83 ntBASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms