Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
TRIM50Q86XT4 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TRIM50Q86XT4 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.41■□□□□ 0.38
TRIM50Q86XT4 AC012441.1-201ENST00000446669 685 ntBASIC17.41■□□□□ 0.38
TRIM50Q86XT4 KLF2P4-201ENST00000451959 1225 ntBASIC17.41■□□□□ 0.38
TRIM50Q86XT4 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM50Q86XT4 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.41■□□□□ 0.38
TRIM50Q86XT4 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM50Q86XT4 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.41■□□□□ 0.38
TRIM50Q86XT4 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM50Q86XT4 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM50Q86XT4 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM50Q86XT4 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM50Q86XT4 AC134312.5-201ENST00000568031 1313 ntBASIC17.41■□□□□ 0.38
TRIM50Q86XT4 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TRIM50Q86XT4 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TRIM50Q86XT4 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TRIM50Q86XT4 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM50Q86XT4 AL603832.2-201ENST00000566195 2125 ntBASIC17.41■□□□□ 0.38
TRIM50Q86XT4 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM50Q86XT4 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM50Q86XT4 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM50Q86XT4 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.4■□□□□ 0.38
TRIM50Q86XT4 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM50Q86XT4 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM50Q86XT4 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM50Q86XT4 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM50Q86XT4 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TRIM50Q86XT4 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM50Q86XT4 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM50Q86XT4 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM50Q86XT4 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM50Q86XT4 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM50Q86XT4 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM50Q86XT4 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM50Q86XT4 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM50Q86XT4 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.4■□□□□ 0.38
TRIM50Q86XT4 AL355864.2-201ENST00000447420 863 ntBASIC17.4■□□□□ 0.38
TRIM50Q86XT4 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.4■□□□□ 0.38
TRIM50Q86XT4 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.4■□□□□ 0.38
TRIM50Q86XT4 AP001582.1-201ENST00000525856 295 ntBASIC17.4■□□□□ 0.38
TRIM50Q86XT4 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.4■□□□□ 0.38
TRIM50Q86XT4 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.4■□□□□ 0.38
TRIM50Q86XT4 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.4■□□□□ 0.38
TRIM50Q86XT4 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.4■□□□□ 0.38
TRIM50Q86XT4 AP001063.1-201ENST00000568332 529 ntBASIC17.4■□□□□ 0.38
TRIM50Q86XT4 AC009486.1-201ENST00000569860 813 ntBASIC17.4■□□□□ 0.38
TRIM50Q86XT4 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM50Q86XT4 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TRIM50Q86XT4 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.4■□□□□ 0.38
TRIM50Q86XT4 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.4■□□□□ 0.38
TRIM50Q86XT4 AC244669.2-201ENST00000612320 853 ntBASIC17.4■□□□□ 0.38
TRIM50Q86XT4 MIR6799-201ENST00000620297 69 ntBASIC17.4■□□□□ 0.38
TRIM50Q86XT4 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM50Q86XT4 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM50Q86XT4 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM50Q86XT4 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM50Q86XT4 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM50Q86XT4 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM50Q86XT4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM50Q86XT4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM50Q86XT4 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRIM50Q86XT4 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.38
TRIM50Q86XT4 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.39■□□□□ 0.38
TRIM50Q86XT4 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRIM50Q86XT4 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
TRIM50Q86XT4 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TRIM50Q86XT4 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM50Q86XT4 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
TRIM50Q86XT4 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.39■□□□□ 0.37
TRIM50Q86XT4 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM50Q86XT4 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM50Q86XT4 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TRIM50Q86XT4 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM50Q86XT4 AC068418.2-201ENST00000577309 3703 ntBASIC17.39■□□□□ 0.37
TRIM50Q86XT4 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM50Q86XT4 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM50Q86XT4 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM50Q86XT4 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM50Q86XT4 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TRIM50Q86XT4 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.39■□□□□ 0.37
TRIM50Q86XT4 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM50Q86XT4 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.39■□□□□ 0.37
TRIM50Q86XT4 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.39■□□□□ 0.37
TRIM50Q86XT4 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM50Q86XT4 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.39■□□□□ 0.37
TRIM50Q86XT4 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM50Q86XT4 FTH1P14-201ENST00000482930 551 ntBASIC17.39■□□□□ 0.37
TRIM50Q86XT4 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM50Q86XT4 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.39■□□□□ 0.37
TRIM50Q86XT4 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
TRIM50Q86XT4 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM50Q86XT4 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.39■□□□□ 0.37
TRIM50Q86XT4 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.39■□□□□ 0.37
TRIM50Q86XT4 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.39■□□□□ 0.37
TRIM50Q86XT4 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM50Q86XT4 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM50Q86XT4 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TRIM50Q86XT4 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
TRIM50Q86XT4 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms