Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.33■□□□□ 0.04
LRRTM4Q86VH4 AC133539.2-201ENST00000604757 467 ntBASIC15.33■□□□□ 0.04
LRRTM4Q86VH4 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRTM4Q86VH4 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRTM4Q86VH4 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
LRRTM4Q86VH4 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.33■□□□□ 0.04
LRRTM4Q86VH4 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.33■□□□□ 0.04
LRRTM4Q86VH4 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.33■□□□□ 0.04
LRRTM4Q86VH4 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRRTM4Q86VH4 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.33■□□□□ 0.04
LRRTM4Q86VH4 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRRTM4Q86VH4 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRTM4Q86VH4 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRTM4Q86VH4 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRRTM4Q86VH4 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRTM4Q86VH4 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRTM4Q86VH4 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRTM4Q86VH4 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRRTM4Q86VH4 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRTM4Q86VH4 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRTM4Q86VH4 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.33■□□□□ 0.04
LRRTM4Q86VH4 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRTM4Q86VH4 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.33■□□□□ 0.04
LRRTM4Q86VH4 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 AC005034.1-201ENST00000426657 489 ntBASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 VDAC1P7-201ENST00000462417 847 ntBASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 CR383656.12-201ENST00000549567 513 ntBASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 HYMAI-201ENST00000635591 3347 ntBASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRTM4Q86VH4 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRTM4Q86VH4 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LRRTM4Q86VH4 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRTM4Q86VH4 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.31■□□□□ 0.04
LRRTM4Q86VH4 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.31■□□□□ 0.04
LRRTM4Q86VH4 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.31■□□□□ 0.04
LRRTM4Q86VH4 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.31■□□□□ 0.04
LRRTM4Q86VH4 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
LRRTM4Q86VH4 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms