Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
MRPL54Q6P161 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
MRPL54Q6P161 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.51
MRPL54Q6P161 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC11.9□□□□□ -0.51
MRPL54Q6P161 TKT-201ENST00000296289 1931 ntTSL 5 BASIC11.9□□□□□ -0.51
MRPL54Q6P161 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
MRPL54Q6P161 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL54Q6P161 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL54Q6P161 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC11.89□□□□□ -0.51
MRPL54Q6P161 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL54Q6P161 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL54Q6P161 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
MRPL54Q6P161 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL54Q6P161 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL54Q6P161 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL54Q6P161 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC11.89□□□□□ -0.51
MRPL54Q6P161 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL54Q6P161 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC11.89□□□□□ -0.51
MRPL54Q6P161 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL54Q6P161 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL54Q6P161 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
MRPL54Q6P161 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL54Q6P161 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL54Q6P161 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL54Q6P161 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL54Q6P161 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL54Q6P161 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL54Q6P161 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL54Q6P161 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL54Q6P161 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
MRPL54Q6P161 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL54Q6P161 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL54Q6P161 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
MRPL54Q6P161 NME2-201ENST00000393183 568 ntTSL 2 BASIC11.89□□□□□ -0.51
MRPL54Q6P161 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC11.89□□□□□ -0.51
MRPL54Q6P161 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL54Q6P161 TSPY15P-201ENST00000457163 923 ntBASIC11.89□□□□□ -0.51
MRPL54Q6P161 SNORA78-201ENST00000459373 127 ntBASIC11.89□□□□□ -0.51
MRPL54Q6P161 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL54Q6P161 ABR-204ENST00000543210 1049 ntTSL 2 BASIC11.89□□□□□ -0.51
MRPL54Q6P161 ABR-217ENST00000572441 563 ntTSL 4 BASIC11.89□□□□□ -0.51
MRPL54Q6P161 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC11.89□□□□□ -0.51
MRPL54Q6P161 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC11.89□□□□□ -0.51
MRPL54Q6P161 LINC01023-201ENST00000606054 436 ntBASIC11.89□□□□□ -0.51
MRPL54Q6P161 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC11.89□□□□□ -0.51
MRPL54Q6P161 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC11.89□□□□□ -0.51
MRPL54Q6P161 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL54Q6P161 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL54Q6P161 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
MRPL54Q6P161 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
MRPL54Q6P161 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL54Q6P161 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL54Q6P161 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL54Q6P161 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
MRPL54Q6P161 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL54Q6P161 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
MRPL54Q6P161 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
MRPL54Q6P161 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL54Q6P161 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL54Q6P161 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
MRPL54Q6P161 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC11.89□□□□□ -0.51
MRPL54Q6P161 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
MRPL54Q6P161 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL54Q6P161 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL54Q6P161 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC11.89□□□□□ -0.51
MRPL54Q6P161 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL54Q6P161 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL54Q6P161 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC11.89□□□□□ -0.51
MRPL54Q6P161 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC11.89□□□□□ -0.51
MRPL54Q6P161 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MRPL54Q6P161 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
MRPL54Q6P161 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC11.88□□□□□ -0.51
MRPL54Q6P161 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL54Q6P161 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL54Q6P161 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL54Q6P161 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL54Q6P161 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL54Q6P161 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC11.88□□□□□ -0.51
MRPL54Q6P161 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC11.88□□□□□ -0.51
MRPL54Q6P161 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC11.88□□□□□ -0.51
MRPL54Q6P161 AC127383.1-201ENST00000444697 1800 ntBASIC11.88□□□□□ -0.51
MRPL54Q6P161 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL54Q6P161 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL54Q6P161 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL54Q6P161 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC11.88□□□□□ -0.51
MRPL54Q6P161 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL54Q6P161 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL54Q6P161 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL54Q6P161 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL54Q6P161 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL54Q6P161 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC11.88□□□□□ -0.51
MRPL54Q6P161 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC11.88□□□□□ -0.51
MRPL54Q6P161 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL54Q6P161 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL54Q6P161 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL54Q6P161 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL54Q6P161 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
MRPL54Q6P161 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC11.88□□□□□ -0.51
MRPL54Q6P161 YBX1P2-201ENST00000489612 999 ntBASIC11.88□□□□□ -0.51
MRPL54Q6P161 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms