Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 RAB43P1-201ENST00000561790 589 ntBASIC14.16□□□□□ -0.14
RTL6Q6ICC9 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RTL6Q6ICC9 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTL6Q6ICC9 AL603832.2-201ENST00000566195 2125 ntBASIC14.15□□□□□ -0.14
RTL6Q6ICC9 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
RTL6Q6ICC9 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.15□□□□□ -0.14
RTL6Q6ICC9 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTL6Q6ICC9 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RTL6Q6ICC9 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RTL6Q6ICC9 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTL6Q6ICC9 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RTL6Q6ICC9 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.15□□□□□ -0.14
RTL6Q6ICC9 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTL6Q6ICC9 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.15□□□□□ -0.14
RTL6Q6ICC9 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RTL6Q6ICC9 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
RTL6Q6ICC9 MIR1909-201ENST00000411312 80 ntBASIC14.15□□□□□ -0.14
RTL6Q6ICC9 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.15□□□□□ -0.14
RTL6Q6ICC9 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTL6Q6ICC9 AC007389.4-201ENST00000454674 793 ntBASIC14.15□□□□□ -0.14
RTL6Q6ICC9 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.15□□□□□ -0.14
RTL6Q6ICC9 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.15□□□□□ -0.14
RTL6Q6ICC9 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.15□□□□□ -0.14
RTL6Q6ICC9 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
RTL6Q6ICC9 RPSAP52-203ENST00000622976 1023 ntBASIC14.15□□□□□ -0.14
RTL6Q6ICC9 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.15□□□□□ -0.14
RTL6Q6ICC9 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.15□□□□□ -0.14
RTL6Q6ICC9 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.15□□□□□ -0.14
RTL6Q6ICC9 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTL6Q6ICC9 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RTL6Q6ICC9 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTL6Q6ICC9 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTL6Q6ICC9 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTL6Q6ICC9 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
RTL6Q6ICC9 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.15□□□□□ -0.14
RTL6Q6ICC9 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTL6Q6ICC9 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTL6Q6ICC9 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RTL6Q6ICC9 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.15□□□□□ -0.15
RTL6Q6ICC9 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
RTL6Q6ICC9 AC134407.2-201ENST00000625089 1978 ntBASIC14.14□□□□□ -0.15
RTL6Q6ICC9 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 KRT18P64-201ENST00000434946 1219 ntBASIC14.14□□□□□ -0.15
RTL6Q6ICC9 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 AC008735.3-201ENST00000596646 500 ntBASIC14.14□□□□□ -0.15
RTL6Q6ICC9 AL512343.1-201ENST00000605837 169 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms