Protein–RNA interactions for Protein: Q68CJ9

CREB3L3, Cyclic AMP-responsive element-binding protein 3-like protein 3, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3L3Q68CJ9 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.59■□□□□ 0.57
CREB3L3Q68CJ9 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CREB3L3Q68CJ9 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.59■□□□□ 0.57
CREB3L3Q68CJ9 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CREB3L3Q68CJ9 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CREB3L3Q68CJ9 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC18.59■□□□□ 0.57
CREB3L3Q68CJ9 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.59■□□□□ 0.57
CREB3L3Q68CJ9 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.59■□□□□ 0.57
CREB3L3Q68CJ9 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CREB3L3Q68CJ9 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.59■□□□□ 0.57
CREB3L3Q68CJ9 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.59■□□□□ 0.57
CREB3L3Q68CJ9 RFPL4AP1-201ENST00000530883 850 ntBASIC18.59■□□□□ 0.57
CREB3L3Q68CJ9 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.59■□□□□ 0.57
CREB3L3Q68CJ9 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.59■□□□□ 0.57
CREB3L3Q68CJ9 AC092337.1-201ENST00000568699 1129 ntBASIC18.59■□□□□ 0.57
CREB3L3Q68CJ9 AC005498.2-205ENST00000593218 784 ntBASIC18.59■□□□□ 0.57
CREB3L3Q68CJ9 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.59■□□□□ 0.57
CREB3L3Q68CJ9 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CREB3L3Q68CJ9 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CREB3L3Q68CJ9 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CREB3L3Q68CJ9 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CREB3L3Q68CJ9 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.59■□□□□ 0.57
CREB3L3Q68CJ9 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CREB3L3Q68CJ9 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CREB3L3Q68CJ9 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CREB3L3Q68CJ9 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CREB3L3Q68CJ9 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC18.59■□□□□ 0.57
CREB3L3Q68CJ9 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CREB3L3Q68CJ9 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC18.59■□□□□ 0.57
CREB3L3Q68CJ9 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC18.59■□□□□ 0.57
CREB3L3Q68CJ9 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CREB3L3Q68CJ9 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CREB3L3Q68CJ9 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC18.58■□□□□ 0.57
CREB3L3Q68CJ9 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC18.58■□□□□ 0.57
CREB3L3Q68CJ9 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC18.58■□□□□ 0.57
CREB3L3Q68CJ9 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CREB3L3Q68CJ9 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CREB3L3Q68CJ9 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CREB3L3Q68CJ9 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CREB3L3Q68CJ9 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CREB3L3Q68CJ9 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.58■□□□□ 0.57
CREB3L3Q68CJ9 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CREB3L3Q68CJ9 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC18.58■□□□□ 0.57
CREB3L3Q68CJ9 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CREB3L3Q68CJ9 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CREB3L3Q68CJ9 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CREB3L3Q68CJ9 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CREB3L3Q68CJ9 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.58■□□□□ 0.56
CREB3L3Q68CJ9 PMS2P2-201ENST00000425039 1128 ntBASIC18.58■□□□□ 0.56
CREB3L3Q68CJ9 AL589987.1-201ENST00000453380 819 ntBASIC18.58■□□□□ 0.56
CREB3L3Q68CJ9 KRT18P43-201ENST00000469825 1281 ntBASIC18.58■□□□□ 0.56
CREB3L3Q68CJ9 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.58■□□□□ 0.56
CREB3L3Q68CJ9 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CREB3L3Q68CJ9 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CREB3L3Q68CJ9 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.58■□□□□ 0.56
CREB3L3Q68CJ9 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CREB3L3Q68CJ9 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CREB3L3Q68CJ9 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CREB3L3Q68CJ9 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CREB3L3Q68CJ9 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CREB3L3Q68CJ9 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CREB3L3Q68CJ9 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CREB3L3Q68CJ9 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC18.58■□□□□ 0.56
CREB3L3Q68CJ9 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CREB3L3Q68CJ9 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CREB3L3Q68CJ9 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
CREB3L3Q68CJ9 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CREB3L3Q68CJ9 CYP2AB1P-202ENST00000454440 1456 ntBASIC18.58■□□□□ 0.56
CREB3L3Q68CJ9 AC138969.3-201ENST00000546612 1459 ntBASIC18.58■□□□□ 0.56
CREB3L3Q68CJ9 AC138932.2-201ENST00000548268 1459 ntBASIC18.58■□□□□ 0.56
CREB3L3Q68CJ9 AC126755.4-201ENST00000549796 1459 ntBASIC18.58■□□□□ 0.56
CREB3L3Q68CJ9 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
CREB3L3Q68CJ9 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CREB3L3Q68CJ9 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CREB3L3Q68CJ9 GSN-215ENST00000545652 2428 ntTSL 2 BASIC18.58■□□□□ 0.56
CREB3L3Q68CJ9 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CREB3L3Q68CJ9 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CREB3L3Q68CJ9 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CREB3L3Q68CJ9 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CREB3L3Q68CJ9 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CREB3L3Q68CJ9 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CREB3L3Q68CJ9 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CREB3L3Q68CJ9 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CREB3L3Q68CJ9 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CREB3L3Q68CJ9 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CREB3L3Q68CJ9 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CREB3L3Q68CJ9 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CREB3L3Q68CJ9 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CREB3L3Q68CJ9 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CREB3L3Q68CJ9 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CREB3L3Q68CJ9 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
CREB3L3Q68CJ9 MRPS18AP1-201ENST00000414458 589 ntBASIC18.57■□□□□ 0.56
CREB3L3Q68CJ9 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.57■□□□□ 0.56
CREB3L3Q68CJ9 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.57■□□□□ 0.56
CREB3L3Q68CJ9 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CREB3L3Q68CJ9 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.57■□□□□ 0.56
CREB3L3Q68CJ9 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.57■□□□□ 0.56
CREB3L3Q68CJ9 TBCB-211ENST00000589996 724 ntTSL 3 BASIC18.57■□□□□ 0.56
CREB3L3Q68CJ9 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC18.57■□□□□ 0.56
CREB3L3Q68CJ9 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms