Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDS5AQ29RF7 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC18.56■□□□□ 0.56
PDS5AQ29RF7 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PDS5AQ29RF7 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC18.56■□□□□ 0.56
PDS5AQ29RF7 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDS5AQ29RF7 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC18.56■□□□□ 0.56
PDS5AQ29RF7 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC18.56■□□□□ 0.56
PDS5AQ29RF7 ETV2-208ENST00000621247 941 ntTSL 5 BASIC18.56■□□□□ 0.56
PDS5AQ29RF7 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC18.56■□□□□ 0.56
PDS5AQ29RF7 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDS5AQ29RF7 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDS5AQ29RF7 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDS5AQ29RF7 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.56■□□□□ 0.56
PDS5AQ29RF7 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDS5AQ29RF7 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDS5AQ29RF7 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PDS5AQ29RF7 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDS5AQ29RF7 REXO1L6P-201ENST00000603433 1515 ntBASIC18.56■□□□□ 0.56
PDS5AQ29RF7 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.56■□□□□ 0.56
PDS5AQ29RF7 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDS5AQ29RF7 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDS5AQ29RF7 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDS5AQ29RF7 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PDS5AQ29RF7 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
PDS5AQ29RF7 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.55■□□□□ 0.56
PDS5AQ29RF7 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDS5AQ29RF7 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDS5AQ29RF7 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDS5AQ29RF7 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
PDS5AQ29RF7 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDS5AQ29RF7 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
PDS5AQ29RF7 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.55■□□□□ 0.56
PDS5AQ29RF7 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDS5AQ29RF7 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDS5AQ29RF7 APOC3-202ENST00000375345 604 ntTSL 5 BASIC18.55■□□□□ 0.56
PDS5AQ29RF7 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDS5AQ29RF7 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDS5AQ29RF7 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC18.55■□□□□ 0.56
PDS5AQ29RF7 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC18.55■□□□□ 0.56
PDS5AQ29RF7 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
PDS5AQ29RF7 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC18.55■□□□□ 0.56
PDS5AQ29RF7 EIF3FP3-201ENST00000434851 1086 ntBASIC18.55■□□□□ 0.56
PDS5AQ29RF7 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC18.55■□□□□ 0.56
PDS5AQ29RF7 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PDS5AQ29RF7 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDS5AQ29RF7 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC18.55■□□□□ 0.56
PDS5AQ29RF7 AC023310.1-201ENST00000554836 735 ntBASIC18.55■□□□□ 0.56
PDS5AQ29RF7 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC18.55■□□□□ 0.56
PDS5AQ29RF7 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC18.55■□□□□ 0.56
PDS5AQ29RF7 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC18.55■□□□□ 0.56
PDS5AQ29RF7 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDS5AQ29RF7 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC18.55■□□□□ 0.56
PDS5AQ29RF7 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC18.55■□□□□ 0.56
PDS5AQ29RF7 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDS5AQ29RF7 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC18.55■□□□□ 0.56
PDS5AQ29RF7 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDS5AQ29RF7 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
PDS5AQ29RF7 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC18.55■□□□□ 0.56
PDS5AQ29RF7 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDS5AQ29RF7 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDS5AQ29RF7 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDS5AQ29RF7 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDS5AQ29RF7 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
PDS5AQ29RF7 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.55■□□□□ 0.56
PDS5AQ29RF7 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.55■□□□□ 0.56
PDS5AQ29RF7 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
PDS5AQ29RF7 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDS5AQ29RF7 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
PDS5AQ29RF7 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.55■□□□□ 0.56
PDS5AQ29RF7 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDS5AQ29RF7 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDS5AQ29RF7 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC18.54■□□□□ 0.56
PDS5AQ29RF7 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC18.54■□□□□ 0.56
PDS5AQ29RF7 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
PDS5AQ29RF7 MIR1908-201ENST00000410394 80 ntBASIC18.54■□□□□ 0.56
PDS5AQ29RF7 HLA-K-203ENST00000430151 1046 ntBASIC18.54■□□□□ 0.56
PDS5AQ29RF7 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDS5AQ29RF7 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDS5AQ29RF7 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PDS5AQ29RF7 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC18.54■□□□□ 0.56
PDS5AQ29RF7 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
PDS5AQ29RF7 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC18.54■□□□□ 0.56
PDS5AQ29RF7 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC18.54■□□□□ 0.56
PDS5AQ29RF7 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PDS5AQ29RF7 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDS5AQ29RF7 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDS5AQ29RF7 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDS5AQ29RF7 CICP13-201ENST00000422015 2789 ntBASIC18.54■□□□□ 0.56
PDS5AQ29RF7 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDS5AQ29RF7 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
PDS5AQ29RF7 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
PDS5AQ29RF7 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.54■□□□□ 0.56
PDS5AQ29RF7 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC18.54■□□□□ 0.56
PDS5AQ29RF7 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC18.54■□□□□ 0.56
PDS5AQ29RF7 AC090616.6-203ENST00000579186 1945 ntBASIC18.54■□□□□ 0.56
PDS5AQ29RF7 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PDS5AQ29RF7 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PDS5AQ29RF7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDS5AQ29RF7 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
PDS5AQ29RF7 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms