Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.06□□□□□ -0.16
RAB40BQ12829 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40BQ12829 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40BQ12829 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.06□□□□□ -0.16
RAB40BQ12829 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40BQ12829 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB40BQ12829 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.06□□□□□ -0.16
RAB40BQ12829 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40BQ12829 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
RAB40BQ12829 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RAB40BQ12829 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40BQ12829 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40BQ12829 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB40BQ12829 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB40BQ12829 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
RAB40BQ12829 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40BQ12829 CYP4F24P-201ENST00000586049 1580 ntBASIC14.05□□□□□ -0.16
RAB40BQ12829 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.05□□□□□ -0.16
RAB40BQ12829 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40BQ12829 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
RAB40BQ12829 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40BQ12829 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40BQ12829 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB40BQ12829 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40BQ12829 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40BQ12829 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40BQ12829 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40BQ12829 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40BQ12829 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40BQ12829 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
RAB40BQ12829 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40BQ12829 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB40BQ12829 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RAB40BQ12829 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB40BQ12829 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
RAB40BQ12829 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.05□□□□□ -0.16
RAB40BQ12829 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.05□□□□□ -0.16
RAB40BQ12829 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.05□□□□□ -0.16
RAB40BQ12829 AC011467.4-201ENST00000594891 528 ntBASIC14.05□□□□□ -0.16
RAB40BQ12829 AC097359.3-201ENST00000603982 1210 ntBASIC14.05□□□□□ -0.16
RAB40BQ12829 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.05□□□□□ -0.16
RAB40BQ12829 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40BQ12829 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40BQ12829 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40BQ12829 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40BQ12829 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB40BQ12829 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40BQ12829 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40BQ12829 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40BQ12829 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40BQ12829 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40BQ12829 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RAB40BQ12829 REXO1L2P-201ENST00000425429 2069 ntBASIC14.05□□□□□ -0.16
RAB40BQ12829 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40BQ12829 FOXO1B-201ENST00000504678 1527 ntBASIC14.05□□□□□ -0.16
RAB40BQ12829 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40BQ12829 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB40BQ12829 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RAB40BQ12829 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40BQ12829 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB40BQ12829 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.04□□□□□ -0.16
RAB40BQ12829 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
RAB40BQ12829 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB40BQ12829 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.04□□□□□ -0.16
RAB40BQ12829 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
RAB40BQ12829 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40BQ12829 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.04□□□□□ -0.16
RAB40BQ12829 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.04□□□□□ -0.16
RAB40BQ12829 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.04□□□□□ -0.16
RAB40BQ12829 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40BQ12829 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
RAB40BQ12829 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB40BQ12829 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40BQ12829 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40BQ12829 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40BQ12829 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40BQ12829 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
RAB40BQ12829 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
RAB40BQ12829 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.04□□□□□ -0.16
RAB40BQ12829 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.04□□□□□ -0.16
RAB40BQ12829 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
RAB40BQ12829 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
RAB40BQ12829 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
RAB40BQ12829 AC098831.1-202ENST00000438821 336 ntBASIC14.04□□□□□ -0.16
RAB40BQ12829 AL139010.1-201ENST00000454878 894 ntBASIC14.04□□□□□ -0.16
RAB40BQ12829 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
RAB40BQ12829 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB40BQ12829 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.04□□□□□ -0.16
RAB40BQ12829 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40BQ12829 HNRNPUP1-201ENST00000554987 333 ntBASIC14.04□□□□□ -0.16
RAB40BQ12829 AL138918.1-201ENST00000568306 659 ntBASIC14.04□□□□□ -0.16
RAB40BQ12829 AL031008.1-201ENST00000619963 541 ntBASIC14.04□□□□□ -0.16
RAB40BQ12829 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.04□□□□□ -0.16
RAB40BQ12829 AC148477.8-201ENST00000624298 468 ntBASIC14.04□□□□□ -0.16
RAB40BQ12829 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
RAB40BQ12829 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.04□□□□□ -0.16
RAB40BQ12829 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40BQ12829 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40BQ12829 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40BQ12829 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms