Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.39■□□□□ 0.21
IRX4P78413 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
IRX4P78413 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.39■□□□□ 0.21
IRX4P78413 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
IRX4P78413 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IRX4P78413 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IRX4P78413 INE1-201ENST00000456273 945 ntBASIC16.39■□□□□ 0.21
IRX4P78413 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.39■□□□□ 0.21
IRX4P78413 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
IRX4P78413 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IRX4P78413 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.39■□□□□ 0.21
IRX4P78413 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.39■□□□□ 0.21
IRX4P78413 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IRX4P78413 AC073389.1-201ENST00000595595 795 ntBASIC16.39■□□□□ 0.21
IRX4P78413 AC017083.2-201ENST00000608069 979 ntBASIC16.39■□□□□ 0.21
IRX4P78413 AL844908.2-201ENST00000609461 460 ntBASIC16.39■□□□□ 0.21
IRX4P78413 IGHV3-72-202ENST00000621503 303 ntBASIC16.39■□□□□ 0.21
IRX4P78413 AC112504.1-201ENST00000623415 1841 ntBASIC16.39■□□□□ 0.21
IRX4P78413 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IRX4P78413 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IRX4P78413 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.39■□□□□ 0.21
IRX4P78413 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IRX4P78413 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IRX4P78413 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IRX4P78413 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
IRX4P78413 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
IRX4P78413 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IRX4P78413 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.39■□□□□ 0.21
IRX4P78413 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
IRX4P78413 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IRX4P78413 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IRX4P78413 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IRX4P78413 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
IRX4P78413 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IRX4P78413 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.38■□□□□ 0.21
IRX4P78413 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IRX4P78413 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.38■□□□□ 0.21
IRX4P78413 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.38■□□□□ 0.21
IRX4P78413 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
IRX4P78413 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IRX4P78413 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
IRX4P78413 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
IRX4P78413 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IRX4P78413 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.38■□□□□ 0.21
IRX4P78413 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.38■□□□□ 0.21
IRX4P78413 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
IRX4P78413 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IRX4P78413 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
IRX4P78413 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
IRX4P78413 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IRX4P78413 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
IRX4P78413 RPL37AP1-201ENST00000412502 279 ntBASIC16.38■□□□□ 0.21
IRX4P78413 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.38■□□□□ 0.21
IRX4P78413 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IRX4P78413 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
IRX4P78413 MTND6P24-201ENST00000440466 518 ntBASIC16.38■□□□□ 0.21
IRX4P78413 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.38■□□□□ 0.21
IRX4P78413 KRT18P34-201ENST00000488218 1270 ntBASIC16.38■□□□□ 0.21
IRX4P78413 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.38■□□□□ 0.21
IRX4P78413 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
IRX4P78413 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
IRX4P78413 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
IRX4P78413 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.38■□□□□ 0.21
IRX4P78413 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.38■□□□□ 0.21
IRX4P78413 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.38■□□□□ 0.21
IRX4P78413 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
IRX4P78413 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.38■□□□□ 0.21
IRX4P78413 AC004840.1-201ENST00000636359 365 ntBASIC16.38■□□□□ 0.21
IRX4P78413 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
IRX4P78413 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
IRX4P78413 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.38■□□□□ 0.21
IRX4P78413 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IRX4P78413 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IRX4P78413 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IRX4P78413 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.38■□□□□ 0.21
IRX4P78413 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IRX4P78413 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IRX4P78413 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
IRX4P78413 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
IRX4P78413 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
IRX4P78413 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
IRX4P78413 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.38■□□□□ 0.21
IRX4P78413 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.37■□□□□ 0.21
IRX4P78413 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IRX4P78413 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.37■□□□□ 0.21
IRX4P78413 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
IRX4P78413 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.37■□□□□ 0.21
IRX4P78413 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IRX4P78413 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
IRX4P78413 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
IRX4P78413 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.37■□□□□ 0.21
IRX4P78413 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.37■□□□□ 0.21
IRX4P78413 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IRX4P78413 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
IRX4P78413 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.37■□□□□ 0.21
IRX4P78413 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
IRX4P78413 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
IRX4P78413 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
IRX4P78413 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
IRX4P78413 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms