Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.66■□□□□ 0.42
CCNA1P78396 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNA1P78396 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.65■□□□□ 0.42
CCNA1P78396 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNA1P78396 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
CCNA1P78396 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.65■□□□□ 0.42
CCNA1P78396 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNA1P78396 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNA1P78396 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCNA1P78396 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNA1P78396 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCNA1P78396 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
CCNA1P78396 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNA1P78396 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNA1P78396 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNA1P78396 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.65■□□□□ 0.42
CCNA1P78396 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNA1P78396 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNA1P78396 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCNA1P78396 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCNA1P78396 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CCNA1P78396 AL139094.1-201ENST00000405549 1188 ntBASIC17.65■□□□□ 0.42
CCNA1P78396 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.65■□□□□ 0.42
CCNA1P78396 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.65■□□□□ 0.42
CCNA1P78396 FNTAP2-201ENST00000430308 634 ntBASIC17.65■□□□□ 0.42
CCNA1P78396 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.65■□□□□ 0.42
CCNA1P78396 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.65■□□□□ 0.42
CCNA1P78396 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCNA1P78396 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.65■□□□□ 0.42
CCNA1P78396 ACTG1P17-201ENST00000558391 1119 ntBASIC17.65■□□□□ 0.42
CCNA1P78396 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.65■□□□□ 0.42
CCNA1P78396 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.65■□□□□ 0.42
CCNA1P78396 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.65■□□□□ 0.42
CCNA1P78396 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CCNA1P78396 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.65■□□□□ 0.42
CCNA1P78396 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.65■□□□□ 0.42
CCNA1P78396 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNA1P78396 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNA1P78396 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCNA1P78396 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNA1P78396 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNA1P78396 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CCNA1P78396 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNA1P78396 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNA1P78396 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.65■□□□□ 0.42
CCNA1P78396 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCNA1P78396 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.64■□□□□ 0.41
CCNA1P78396 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCNA1P78396 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCNA1P78396 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.64■□□□□ 0.41
CCNA1P78396 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.64■□□□□ 0.41
CCNA1P78396 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.64■□□□□ 0.41
CCNA1P78396 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CCNA1P78396 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCNA1P78396 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCNA1P78396 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCNA1P78396 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.64■□□□□ 0.41
CCNA1P78396 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCNA1P78396 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CCNA1P78396 NDUFAB1P1-201ENST00000404262 460 ntBASIC17.64■□□□□ 0.41
CCNA1P78396 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.64■□□□□ 0.41
CCNA1P78396 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.64■□□□□ 0.41
CCNA1P78396 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.64■□□□□ 0.41
CCNA1P78396 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.64■□□□□ 0.41
CCNA1P78396 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.64■□□□□ 0.41
CCNA1P78396 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.64■□□□□ 0.41
CCNA1P78396 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.64■□□□□ 0.41
CCNA1P78396 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.64■□□□□ 0.41
CCNA1P78396 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.64■□□□□ 0.41
CCNA1P78396 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
CCNA1P78396 AL021578.1-201ENST00000613646 709 ntBASIC17.64■□□□□ 0.41
CCNA1P78396 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCNA1P78396 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCNA1P78396 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CCNA1P78396 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCNA1P78396 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCNA1P78396 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCNA1P78396 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.64■□□□□ 0.41
CCNA1P78396 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCNA1P78396 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCNA1P78396 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCNA1P78396 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCNA1P78396 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCNA1P78396 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCNA1P78396 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.63■□□□□ 0.41
CCNA1P78396 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCNA1P78396 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCNA1P78396 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCNA1P78396 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCNA1P78396 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CCNA1P78396 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.63■□□□□ 0.41
CCNA1P78396 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCNA1P78396 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCNA1P78396 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCNA1P78396 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
CCNA1P78396 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCNA1P78396 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
CCNA1P78396 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCNA1P78396 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
CCNA1P78396 ELK2AP-201ENST00000392510 1007 ntBASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms