Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.39■□□□□ 0.53
CACNB3P54284 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNB3P54284 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNB3P54284 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNB3P54284 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
CACNB3P54284 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNB3P54284 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
CACNB3P54284 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CACNB3P54284 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CACNB3P54284 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.38■□□□□ 0.53
CACNB3P54284 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
CACNB3P54284 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CACNB3P54284 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNB3P54284 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CACNB3P54284 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CACNB3P54284 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC18.38■□□□□ 0.53
CACNB3P54284 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC18.38■□□□□ 0.53
CACNB3P54284 PFN2-205ENST00000461868 613 ntTSL 2 BASIC18.38■□□□□ 0.53
CACNB3P54284 AP001258.2-201ENST00000529891 490 ntBASIC18.38■□□□□ 0.53
CACNB3P54284 AP006547.1-201ENST00000563435 692 ntBASIC18.38■□□□□ 0.53
CACNB3P54284 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC18.38■□□□□ 0.53
CACNB3P54284 AL096828.3-201ENST00000615354 462 ntBASIC18.38■□□□□ 0.53
CACNB3P54284 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNB3P54284 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNB3P54284 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNB3P54284 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNB3P54284 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CACNB3P54284 AC006449.5-201ENST00000610658 2098 ntBASIC18.38■□□□□ 0.53
CACNB3P54284 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CACNB3P54284 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNB3P54284 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CACNB3P54284 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.38■□□□□ 0.53
CACNB3P54284 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.38■□□□□ 0.53
CACNB3P54284 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNB3P54284 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNB3P54284 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNB3P54284 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNB3P54284 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CACNB3P54284 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CACNB3P54284 AC112504.1-201ENST00000623415 1841 ntBASIC18.37■□□□□ 0.53
CACNB3P54284 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CACNB3P54284 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CACNB3P54284 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
CACNB3P54284 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CACNB3P54284 RPS3-201ENST00000278572 907 ntTSL 3 BASIC18.37■□□□□ 0.53
CACNB3P54284 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CACNB3P54284 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC18.37■□□□□ 0.53
CACNB3P54284 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CACNB3P54284 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.37■□□□□ 0.53
CACNB3P54284 MTX1P1-201ENST00000440904 838 ntBASIC18.37■□□□□ 0.53
CACNB3P54284 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CACNB3P54284 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC18.37■□□□□ 0.53
CACNB3P54284 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC18.37■□□□□ 0.53
CACNB3P54284 AC104982.3-201ENST00000581995 514 ntBASIC18.37■□□□□ 0.53
CACNB3P54284 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC18.37■□□□□ 0.53
CACNB3P54284 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CACNB3P54284 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CACNB3P54284 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CACNB3P54284 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.37■□□□□ 0.53
CACNB3P54284 AL354989.2-201ENST00000435838 1540 ntBASIC18.37■□□□□ 0.53
CACNB3P54284 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CACNB3P54284 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CACNB3P54284 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CACNB3P54284 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CACNB3P54284 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CACNB3P54284 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CACNB3P54284 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.37■□□□□ 0.53
CACNB3P54284 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CACNB3P54284 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CACNB3P54284 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.36■□□□□ 0.53
CACNB3P54284 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CACNB3P54284 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
CACNB3P54284 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CACNB3P54284 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CACNB3P54284 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.36■□□□□ 0.53
CACNB3P54284 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CACNB3P54284 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CACNB3P54284 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.36■□□□□ 0.53
CACNB3P54284 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.36■□□□□ 0.53
CACNB3P54284 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CACNB3P54284 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CACNB3P54284 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CACNB3P54284 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC18.36■□□□□ 0.53
CACNB3P54284 HARS-202ENST00000415192 1401 ntTSL 2 BASIC18.36■□□□□ 0.53
CACNB3P54284 AC004945.1-201ENST00000416738 983 ntBASIC18.36■□□□□ 0.53
CACNB3P54284 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC18.36■□□□□ 0.53
CACNB3P54284 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC18.36■□□□□ 0.53
CACNB3P54284 AC018735.1-201ENST00000437208 1502 ntBASIC18.36■□□□□ 0.53
CACNB3P54284 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CACNB3P54284 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CACNB3P54284 OARD1-212ENST00000482515 832 ntTSL 2 BASIC18.36■□□□□ 0.53
CACNB3P54284 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC18.36■□□□□ 0.53
CACNB3P54284 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC18.36■□□□□ 0.53
CACNB3P54284 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CACNB3P54284 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC18.36■□□□□ 0.53
CACNB3P54284 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CACNB3P54284 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC18.36■□□□□ 0.53
CACNB3P54284 CYGB-203ENST00000589145 788 ntTSL 3 BASIC18.36■□□□□ 0.53
CACNB3P54284 AL021578.1-201ENST00000613646 709 ntBASIC18.36■□□□□ 0.53
CACNB3P54284 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms