Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5CP51148 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
RAB5CP51148 COX11P1-201ENST00000489116 835 ntBASIC12.66□□□□□ -0.38
RAB5CP51148 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC12.66□□□□□ -0.38
RAB5CP51148 AC005412.3-201ENST00000580309 715 ntBASIC12.66□□□□□ -0.38
RAB5CP51148 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5CP51148 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5CP51148 BSG-214ENST00000614867 960 ntTSL 3 BASIC12.66□□□□□ -0.38
RAB5CP51148 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.66□□□□□ -0.38
RAB5CP51148 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5CP51148 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5CP51148 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5CP51148 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5CP51148 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5CP51148 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5CP51148 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
RAB5CP51148 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.66□□□□□ -0.38
RAB5CP51148 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC12.66□□□□□ -0.38
RAB5CP51148 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5CP51148 AC073869.1-201ENST00000415574 2762 ntBASIC12.66□□□□□ -0.38
RAB5CP51148 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.66□□□□□ -0.38
RAB5CP51148 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5CP51148 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5CP51148 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5CP51148 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.66□□□□□ -0.38
RAB5CP51148 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5CP51148 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
RAB5CP51148 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
RAB5CP51148 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC12.66□□□□□ -0.38
RAB5CP51148 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5CP51148 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5CP51148 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5CP51148 TP73-AS1-210ENST00000637775 1455 ntBASIC12.65□□□□□ -0.38
RAB5CP51148 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB5CP51148 CES1P1-201ENST00000421606 1704 ntBASIC12.65□□□□□ -0.38
RAB5CP51148 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC12.65□□□□□ -0.38
RAB5CP51148 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB5CP51148 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.65□□□□□ -0.38
RAB5CP51148 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RAB5CP51148 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RAB5CP51148 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RAB5CP51148 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB5CP51148 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB5CP51148 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
RAB5CP51148 INTS4P1-201ENST00000438455 1935 ntBASIC12.65□□□□□ -0.38
RAB5CP51148 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
RAB5CP51148 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RAB5CP51148 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB5CP51148 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RAB5CP51148 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB5CP51148 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC12.65□□□□□ -0.38
RAB5CP51148 CD70-202ENST00000423145 881 ntTSL 2 BASIC12.65□□□□□ -0.38
RAB5CP51148 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RAB5CP51148 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC12.65□□□□□ -0.38
RAB5CP51148 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB5CP51148 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RAB5CP51148 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC12.65□□□□□ -0.38
RAB5CP51148 CYB561-217ENST00000582997 877 ntTSL 5 BASIC12.65□□□□□ -0.38
RAB5CP51148 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC12.65□□□□□ -0.38
RAB5CP51148 IGHV3-41-201ENST00000613121 348 ntBASIC12.65□□□□□ -0.38
RAB5CP51148 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC12.65□□□□□ -0.38
RAB5CP51148 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
RAB5CP51148 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB5CP51148 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC12.65□□□□□ -0.38
RAB5CP51148 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB5CP51148 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC12.65□□□□□ -0.38
RAB5CP51148 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB5CP51148 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB5CP51148 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RAB5CP51148 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
RAB5CP51148 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
RAB5CP51148 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
RAB5CP51148 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
RAB5CP51148 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC12.65□□□□□ -0.38
RAB5CP51148 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.65□□□□□ -0.38
RAB5CP51148 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
RAB5CP51148 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB5CP51148 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB5CP51148 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RAB5CP51148 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
RAB5CP51148 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
RAB5CP51148 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
RAB5CP51148 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB5CP51148 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB5CP51148 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB5CP51148 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC12.64□□□□□ -0.39
RAB5CP51148 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
RAB5CP51148 AC113367.3-201ENST00000508316 1912 ntBASIC12.64□□□□□ -0.39
RAB5CP51148 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB5CP51148 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB5CP51148 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB5CP51148 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RAB5CP51148 FLII-221ENST00000578558 2377 ntTSL 5 BASIC12.64□□□□□ -0.39
RAB5CP51148 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB5CP51148 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB5CP51148 SLC9A3P3-201ENST00000457608 2229 ntBASIC12.64□□□□□ -0.39
RAB5CP51148 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RAB5CP51148 SOD2-201ENST00000337404 991 ntTSL 2 BASIC12.64□□□□□ -0.39
RAB5CP51148 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB5CP51148 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms