Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.12□□□□□ -0.15
ATRXP46100 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATRXP46100 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ATRXP46100 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
ATRXP46100 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATRXP46100 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATRXP46100 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATRXP46100 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ATRXP46100 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ATRXP46100 CCL25-202ENST00000315626 450 ntTSL 2 BASIC14.12□□□□□ -0.15
ATRXP46100 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ATRXP46100 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC14.12□□□□□ -0.15
ATRXP46100 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.12□□□□□ -0.15
ATRXP46100 AC090820.1-201ENST00000519722 591 ntBASIC14.12□□□□□ -0.15
ATRXP46100 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.12□□□□□ -0.15
ATRXP46100 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC14.12□□□□□ -0.15
ATRXP46100 RN7SL48P-201ENST00000579283 293 ntBASIC14.12□□□□□ -0.15
ATRXP46100 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
ATRXP46100 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC14.12□□□□□ -0.15
ATRXP46100 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.12□□□□□ -0.15
ATRXP46100 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
ATRXP46100 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATRXP46100 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATRXP46100 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ATRXP46100 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATRXP46100 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATRXP46100 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC14.11□□□□□ -0.15
ATRXP46100 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATRXP46100 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.11□□□□□ -0.15
ATRXP46100 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
ATRXP46100 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC14.11□□□□□ -0.15
ATRXP46100 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATRXP46100 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATRXP46100 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC14.11□□□□□ -0.15
ATRXP46100 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATRXP46100 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATRXP46100 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATRXP46100 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATRXP46100 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ATRXP46100 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATRXP46100 HPGD-203ENST00000422112 805 ntTSL 2 BASIC14.11□□□□□ -0.15
ATRXP46100 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC14.11□□□□□ -0.15
ATRXP46100 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC14.11□□□□□ -0.15
ATRXP46100 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.11□□□□□ -0.15
ATRXP46100 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.11□□□□□ -0.15
ATRXP46100 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
ATRXP46100 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.11□□□□□ -0.15
ATRXP46100 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC14.11□□□□□ -0.15
ATRXP46100 AC012044.1-201ENST00000603431 297 ntBASIC14.11□□□□□ -0.15
ATRXP46100 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC14.11□□□□□ -0.15
ATRXP46100 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
ATRXP46100 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATRXP46100 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ATRXP46100 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.11□□□□□ -0.15
ATRXP46100 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
ATRXP46100 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATRXP46100 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.11□□□□□ -0.15
ATRXP46100 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ATRXP46100 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
ATRXP46100 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ATRXP46100 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ATRXP46100 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
ATRXP46100 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATRXP46100 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.11□□□□□ -0.15
ATRXP46100 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATRXP46100 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ATRXP46100 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ATRXP46100 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
ATRXP46100 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
ATRXP46100 NHP2-202ENST00000314397 599 ntTSL 2 BASIC14.1□□□□□ -0.15
ATRXP46100 DPM3-202ENST00000368399 517 ntBASIC14.1□□□□□ -0.15
ATRXP46100 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATRXP46100 GCSHP3-201ENST00000431120 391 ntBASIC14.1□□□□□ -0.15
ATRXP46100 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
ATRXP46100 AC108724.1-201ENST00000481669 352 ntBASIC14.1□□□□□ -0.15
ATRXP46100 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC14.1□□□□□ -0.15
ATRXP46100 AC120498.5-201ENST00000561757 299 ntBASIC14.1□□□□□ -0.15
ATRXP46100 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC14.1□□□□□ -0.15
ATRXP46100 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC14.1□□□□□ -0.15
ATRXP46100 MIEF1-215ENST00000637854 213 ntBASIC14.1□□□□□ -0.15
ATRXP46100 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ATRXP46100 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.1□□□□□ -0.15
ATRXP46100 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
ATRXP46100 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ATRXP46100 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ATRXP46100 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ATRXP46100 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
ATRXP46100 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.1□□□□□ -0.15
ATRXP46100 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ATRXP46100 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ATRXP46100 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ATRXP46100 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATRXP46100 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.1□□□□□ -0.15
ATRXP46100 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC14.1□□□□□ -0.15
ATRXP46100 AC104073.2-201ENST00000453737 312 ntBASIC14.1□□□□□ -0.15
ATRXP46100 AC023906.1-201ENST00000486386 453 ntBASIC14.1□□□□□ -0.15
ATRXP46100 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC14.1□□□□□ -0.15
ATRXP46100 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATRXP46100 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ATRXP46100 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms