Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.32■□□□□ 0.2
MMP13P45452 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
MMP13P45452 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.32■□□□□ 0.2
MMP13P45452 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MMP13P45452 KLF2P3-201ENST00000451977 1087 ntBASIC16.32■□□□□ 0.2
MMP13P45452 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.32■□□□□ 0.2
MMP13P45452 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MMP13P45452 AC067863.1-201ENST00000494933 530 ntBASIC16.32■□□□□ 0.2
MMP13P45452 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.32■□□□□ 0.2
MMP13P45452 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.32■□□□□ 0.2
MMP13P45452 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.32■□□□□ 0.2
MMP13P45452 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
MMP13P45452 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
MMP13P45452 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
MMP13P45452 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.32■□□□□ 0.2
MMP13P45452 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.32■□□□□ 0.2
MMP13P45452 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MMP13P45452 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
MMP13P45452 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
MMP13P45452 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.32■□□□□ 0.2
MMP13P45452 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
MMP13P45452 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
MMP13P45452 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
MMP13P45452 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.32■□□□□ 0.2
MMP13P45452 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MMP13P45452 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
MMP13P45452 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
MMP13P45452 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP13P45452 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC16.31■□□□□ 0.2
MMP13P45452 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.31■□□□□ 0.2
MMP13P45452 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
MMP13P45452 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP13P45452 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.31■□□□□ 0.2
MMP13P45452 KRT8P37-201ENST00000451609 1420 ntBASIC16.31■□□□□ 0.2
MMP13P45452 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP13P45452 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP13P45452 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.31■□□□□ 0.2
MMP13P45452 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
MMP13P45452 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MMP13P45452 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP13P45452 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP13P45452 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
MMP13P45452 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP13P45452 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP13P45452 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MMP13P45452 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.31■□□□□ 0.2
MMP13P45452 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MMP13P45452 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.31■□□□□ 0.2
MMP13P45452 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.31■□□□□ 0.2
MMP13P45452 AC051619.7-201ENST00000568314 623 ntBASIC16.31■□□□□ 0.2
MMP13P45452 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.31■□□□□ 0.2
MMP13P45452 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.31■□□□□ 0.2
MMP13P45452 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.31■□□□□ 0.2
MMP13P45452 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP13P45452 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.31■□□□□ 0.2
MMP13P45452 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP13P45452 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP13P45452 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP13P45452 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
MMP13P45452 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MMP13P45452 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
MMP13P45452 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.31■□□□□ 0.2
MMP13P45452 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP13P45452 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP13P45452 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP13P45452 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP13P45452 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.31■□□□□ 0.2
MMP13P45452 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MMP13P45452 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP13P45452 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.3■□□□□ 0.2
MMP13P45452 AC005912.2-201ENST00000619492 2400 ntBASIC16.3■□□□□ 0.2
MMP13P45452 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP13P45452 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP13P45452 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
MMP13P45452 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MMP13P45452 CETN4P-206ENST00000642099 2168 ntBASIC16.3■□□□□ 0.2
MMP13P45452 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.3■□□□□ 0.2
MMP13P45452 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.3■□□□□ 0.2
MMP13P45452 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
MMP13P45452 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
MMP13P45452 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MMP13P45452 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP13P45452 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP13P45452 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.3■□□□□ 0.2
MMP13P45452 REXO1L1P-202ENST00000608646 1974 ntBASIC16.3■□□□□ 0.2
MMP13P45452 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MMP13P45452 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC16.3■□□□□ 0.2
MMP13P45452 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MMP13P45452 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.3■□□□□ 0.2
MMP13P45452 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MMP13P45452 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MMP13P45452 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP13P45452 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MMP13P45452 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
MMP13P45452 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MMP13P45452 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.3■□□□□ 0.2
MMP13P45452 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.3■□□□□ 0.2
MMP13P45452 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MMP13P45452 AC107890.1-201ENST00000422478 521 ntBASIC16.3■□□□□ 0.2
MMP13P45452 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms