Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT9P35527 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC17.19■□□□□ 0.34
KRT9P35527 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.19■□□□□ 0.34
KRT9P35527 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KRT9P35527 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KRT9P35527 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC17.19■□□□□ 0.34
KRT9P35527 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT9P35527 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT9P35527 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
KRT9P35527 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
KRT9P35527 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT9P35527 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT9P35527 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT9P35527 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
KRT9P35527 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT9P35527 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC17.19■□□□□ 0.34
KRT9P35527 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT9P35527 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KRT9P35527 AL645939.2-201ENST00000427340 991 ntBASIC17.19■□□□□ 0.34
KRT9P35527 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.19■□□□□ 0.34
KRT9P35527 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT9P35527 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.19■□□□□ 0.34
KRT9P35527 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.19■□□□□ 0.34
KRT9P35527 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.19■□□□□ 0.34
KRT9P35527 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT9P35527 AC055717.3-201ENST00000622967 595 ntBASIC17.19■□□□□ 0.34
KRT9P35527 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT9P35527 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.19■□□□□ 0.34
KRT9P35527 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT9P35527 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.19■□□□□ 0.34
KRT9P35527 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT9P35527 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KRT9P35527 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.19■□□□□ 0.34
KRT9P35527 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT9P35527 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
KRT9P35527 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC17.19■□□□□ 0.34
KRT9P35527 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KRT9P35527 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT9P35527 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT9P35527 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT9P35527 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
KRT9P35527 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT9P35527 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT9P35527 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT9P35527 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
KRT9P35527 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
KRT9P35527 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.18■□□□□ 0.34
KRT9P35527 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT9P35527 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT9P35527 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.18■□□□□ 0.34
KRT9P35527 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.18■□□□□ 0.34
KRT9P35527 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
KRT9P35527 AC004461.1-201ENST00000412461 403 ntBASIC17.18■□□□□ 0.34
KRT9P35527 AC211486.1-202ENST00000416371 468 ntBASIC17.18■□□□□ 0.34
KRT9P35527 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.18■□□□□ 0.34
KRT9P35527 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.18■□□□□ 0.34
KRT9P35527 AC211476.1-201ENST00000503899 468 ntBASIC17.18■□□□□ 0.34
KRT9P35527 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
KRT9P35527 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.18■□□□□ 0.34
KRT9P35527 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.18■□□□□ 0.34
KRT9P35527 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.18■□□□□ 0.34
KRT9P35527 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.18■□□□□ 0.34
KRT9P35527 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
KRT9P35527 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC17.18■□□□□ 0.34
KRT9P35527 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT9P35527 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
KRT9P35527 AP3S2-216ENST00000617003 1561 ntBASIC17.18■□□□□ 0.34
KRT9P35527 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.18■□□□□ 0.34
KRT9P35527 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT9P35527 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT9P35527 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT9P35527 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT9P35527 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC17.18■□□□□ 0.34
KRT9P35527 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT9P35527 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
KRT9P35527 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC17.17■□□□□ 0.34
KRT9P35527 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT9P35527 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT9P35527 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT9P35527 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT9P35527 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT9P35527 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT9P35527 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
KRT9P35527 GOLGA8DP-202ENST00000341390 2184 ntBASIC17.17■□□□□ 0.34
KRT9P35527 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.17■□□□□ 0.34
KRT9P35527 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT9P35527 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.17■□□□□ 0.34
KRT9P35527 PHKG1P2-201ENST00000457537 863 ntBASIC17.17■□□□□ 0.34
KRT9P35527 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.17■□□□□ 0.34
KRT9P35527 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.17■□□□□ 0.34
KRT9P35527 AP000344.2-201ENST00000512987 629 ntBASIC17.17■□□□□ 0.34
KRT9P35527 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.17■□□□□ 0.34
KRT9P35527 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.17■□□□□ 0.34
KRT9P35527 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT9P35527 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT9P35527 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
KRT9P35527 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.17■□□□□ 0.34
KRT9P35527 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT9P35527 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT9P35527 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms