Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
PTPN6P29350 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN6P29350 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.88□□□□□ -0.03
PTPN6P29350 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN6P29350 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN6P29350 FLJ16779-201ENST00000612722 7638 ntBASIC14.88□□□□□ -0.03
PTPN6P29350 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN6P29350 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.88□□□□□ -0.03
PTPN6P29350 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.88□□□□□ -0.03
PTPN6P29350 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PTPN6P29350 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN6P29350 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN6P29350 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN6P29350 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.88□□□□□ -0.03
PTPN6P29350 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN6P29350 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.88□□□□□ -0.03
PTPN6P29350 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN6P29350 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.88□□□□□ -0.03
PTPN6P29350 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
PTPN6P29350 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN6P29350 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN6P29350 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN6P29350 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN6P29350 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN6P29350 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.88□□□□□ -0.03
PTPN6P29350 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.88□□□□□ -0.03
PTPN6P29350 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN6P29350 AC067863.1-201ENST00000494933 530 ntBASIC14.88□□□□□ -0.03
PTPN6P29350 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN6P29350 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN6P29350 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
PTPN6P29350 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN6P29350 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
PTPN6P29350 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN6P29350 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
PTPN6P29350 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PTPN6P29350 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.88□□□□□ -0.03
PTPN6P29350 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.88□□□□□ -0.03
PTPN6P29350 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN6P29350 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN6P29350 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PTPN6P29350 TUBB3P1-201ENST00000405796 1332 ntBASIC14.88□□□□□ -0.03
PTPN6P29350 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
PTPN6P29350 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN6P29350 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN6P29350 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN6P29350 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.88□□□□□ -0.03
PTPN6P29350 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN6P29350 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
PTPN6P29350 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN6P29350 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTPN6P29350 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PTPN6P29350 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTPN6P29350 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTPN6P29350 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTPN6P29350 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.87□□□□□ -0.03
PTPN6P29350 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTPN6P29350 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PTPN6P29350 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.87□□□□□ -0.03
PTPN6P29350 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.87□□□□□ -0.03
PTPN6P29350 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTPN6P29350 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTPN6P29350 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PTPN6P29350 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTPN6P29350 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTPN6P29350 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
PTPN6P29350 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTPN6P29350 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTPN6P29350 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PTPN6P29350 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PTPN6P29350 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PTPN6P29350 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PTPN6P29350 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.87□□□□□ -0.03
PTPN6P29350 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.87□□□□□ -0.03
PTPN6P29350 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.87□□□□□ -0.03
PTPN6P29350 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.87□□□□□ -0.03
PTPN6P29350 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.87□□□□□ -0.03
PTPN6P29350 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.87□□□□□ -0.03
PTPN6P29350 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.87□□□□□ -0.03
PTPN6P29350 BANF1P1-201ENST00000553684 263 ntBASIC14.87□□□□□ -0.03
PTPN6P29350 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.87□□□□□ -0.03
PTPN6P29350 AC051619.7-201ENST00000568314 623 ntBASIC14.87□□□□□ -0.03
PTPN6P29350 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTPN6P29350 AC018529.1-201ENST00000613063 361 ntBASIC14.87□□□□□ -0.03
PTPN6P29350 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PTPN6P29350 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.87□□□□□ -0.03
PTPN6P29350 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PTPN6P29350 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.87□□□□□ -0.03
PTPN6P29350 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.87□□□□□ -0.03
PTPN6P29350 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTPN6P29350 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.87□□□□□ -0.03
PTPN6P29350 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.87□□□□□ -0.03
PTPN6P29350 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.87□□□□□ -0.03
PTPN6P29350 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PTPN6P29350 AC007292.2-201ENST00000593524 1812 ntBASIC14.87□□□□□ -0.03
PTPN6P29350 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTPN6P29350 AL390755.1-201ENST00000623716 2027 ntBASIC14.87□□□□□ -0.03
PTPN6P29350 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.87□□□□□ -0.03
PTPN6P29350 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTPN6P29350 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms