Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.44□□□□□ -0.1
ABCD3P28288 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ABCD3P28288 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
ABCD3P28288 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
ABCD3P28288 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
ABCD3P28288 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ABCD3P28288 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.43□□□□□ -0.1
ABCD3P28288 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
ABCD3P28288 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
ABCD3P28288 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ABCD3P28288 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.43□□□□□ -0.1
ABCD3P28288 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ABCD3P28288 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ABCD3P28288 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
ABCD3P28288 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ABCD3P28288 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ABCD3P28288 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.43□□□□□ -0.1
ABCD3P28288 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
ABCD3P28288 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ABCD3P28288 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.43□□□□□ -0.1
ABCD3P28288 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.43□□□□□ -0.1
ABCD3P28288 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.43□□□□□ -0.1
ABCD3P28288 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.43□□□□□ -0.1
ABCD3P28288 AC190387.1-201ENST00000551683 408 ntBASIC14.43□□□□□ -0.1
ABCD3P28288 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.43□□□□□ -0.1
ABCD3P28288 AC036164.1-201ENST00000570544 333 ntBASIC14.43□□□□□ -0.1
ABCD3P28288 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.43□□□□□ -0.1
ABCD3P28288 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.43□□□□□ -0.1
ABCD3P28288 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ABCD3P28288 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.43□□□□□ -0.1
ABCD3P28288 AC099568.2-201ENST00000609194 695 ntBASIC14.43□□□□□ -0.1
ABCD3P28288 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
ABCD3P28288 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ABCD3P28288 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.43□□□□□ -0.1
ABCD3P28288 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ABCD3P28288 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ABCD3P28288 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.43□□□□□ -0.1
ABCD3P28288 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
ABCD3P28288 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
ABCD3P28288 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ABCD3P28288 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ABCD3P28288 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
ABCD3P28288 AC105917.1-201ENST00000506637 2539 ntBASIC14.43□□□□□ -0.1
ABCD3P28288 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ABCD3P28288 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ABCD3P28288 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ABCD3P28288 AC090616.6-203ENST00000579186 1945 ntBASIC14.43□□□□□ -0.1
ABCD3P28288 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ABCD3P28288 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ABCD3P28288 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ABCD3P28288 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ABCD3P28288 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ABCD3P28288 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ABCD3P28288 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
ABCD3P28288 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
ABCD3P28288 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ABCD3P28288 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ABCD3P28288 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ABCD3P28288 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ABCD3P28288 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.42□□□□□ -0.1
ABCD3P28288 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ABCD3P28288 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.42□□□□□ -0.1
ABCD3P28288 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.42□□□□□ -0.1
ABCD3P28288 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ABCD3P28288 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
ABCD3P28288 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
ABCD3P28288 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.42□□□□□ -0.1
ABCD3P28288 AC087499.6-201ENST00000411576 835 ntBASIC14.42□□□□□ -0.1
ABCD3P28288 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.42□□□□□ -0.1
ABCD3P28288 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ABCD3P28288 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.42□□□□□ -0.1
ABCD3P28288 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.42□□□□□ -0.1
ABCD3P28288 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.42□□□□□ -0.1
ABCD3P28288 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.42□□□□□ -0.1
ABCD3P28288 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
ABCD3P28288 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
ABCD3P28288 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
ABCD3P28288 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ABCD3P28288 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ABCD3P28288 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
ABCD3P28288 CLK3P2-201ENST00000427566 1453 ntBASIC14.42□□□□□ -0.1
ABCD3P28288 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ABCD3P28288 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ABCD3P28288 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ABCD3P28288 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ABCD3P28288 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.42□□□□□ -0.1
ABCD3P28288 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.42□□□□□ -0.1
ABCD3P28288 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
ABCD3P28288 AC020658.6-201ENST00000623564 1870 ntBASIC14.42□□□□□ -0.1
ABCD3P28288 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.42□□□□□ -0.1
ABCD3P28288 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ABCD3P28288 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ABCD3P28288 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ABCD3P28288 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ABCD3P28288 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
ABCD3P28288 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ABCD3P28288 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
ABCD3P28288 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.41□□□□□ -0.1
ABCD3P28288 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ABCD3P28288 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms