Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.11■□□□□ 0.17
ERCC2P18074 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.11■□□□□ 0.17
ERCC2P18074 AL133267.1-201ENST00000398220 340 ntBASIC16.11■□□□□ 0.17
ERCC2P18074 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
ERCC2P18074 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.11■□□□□ 0.17
ERCC2P18074 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.11■□□□□ 0.17
ERCC2P18074 UGT1A2P-201ENST00000454886 866 ntBASIC16.11■□□□□ 0.17
ERCC2P18074 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.11■□□□□ 0.17
ERCC2P18074 AC004790.1-201ENST00000612686 536 ntBASIC16.11■□□□□ 0.17
ERCC2P18074 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
ERCC2P18074 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.11■□□□□ 0.17
ERCC2P18074 AC138035.3-201ENST00000622706 2791 ntBASIC16.11■□□□□ 0.17
ERCC2P18074 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.11■□□□□ 0.17
ERCC2P18074 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.11■□□□□ 0.17
ERCC2P18074 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.11■□□□□ 0.17
ERCC2P18074 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
ERCC2P18074 LINC00554-201ENST00000564841 3011 ntBASIC16.11■□□□□ 0.17
ERCC2P18074 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ERCC2P18074 AL109954.1-202ENST00000564051 2148 ntBASIC16.1■□□□□ 0.17
ERCC2P18074 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ERCC2P18074 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ERCC2P18074 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.1■□□□□ 0.17
ERCC2P18074 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ERCC2P18074 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ERCC2P18074 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ERCC2P18074 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ERCC2P18074 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.1■□□□□ 0.17
ERCC2P18074 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.1■□□□□ 0.17
ERCC2P18074 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
ERCC2P18074 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ERCC2P18074 AC144831.1-201ENST00000573312 2656 ntBASIC16.1■□□□□ 0.17
ERCC2P18074 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ERCC2P18074 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ERCC2P18074 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ERCC2P18074 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.1■□□□□ 0.17
ERCC2P18074 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ERCC2P18074 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ERCC2P18074 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.1■□□□□ 0.17
ERCC2P18074 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ERCC2P18074 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ERCC2P18074 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.1■□□□□ 0.17
ERCC2P18074 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.1■□□□□ 0.17
ERCC2P18074 MEIS3P1-201ENST00000495167 958 ntBASIC16.1■□□□□ 0.17
ERCC2P18074 AC104794.3-201ENST00000566840 1248 ntBASIC16.1■□□□□ 0.17
ERCC2P18074 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.1■□□□□ 0.17
ERCC2P18074 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.1■□□□□ 0.17
ERCC2P18074 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.1■□□□□ 0.17
ERCC2P18074 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.1■□□□□ 0.17
ERCC2P18074 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ERCC2P18074 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ERCC2P18074 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.1■□□□□ 0.17
ERCC2P18074 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
ERCC2P18074 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ERCC2P18074 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
ERCC2P18074 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ERCC2P18074 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ERCC2P18074 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.1■□□□□ 0.17
ERCC2P18074 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ERCC2P18074 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ERCC2P18074 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.1■□□□□ 0.17
ERCC2P18074 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ERCC2P18074 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.1■□□□□ 0.17
ERCC2P18074 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
ERCC2P18074 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
ERCC2P18074 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.09■□□□□ 0.17
ERCC2P18074 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.09■□□□□ 0.17
ERCC2P18074 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.09■□□□□ 0.17
ERCC2P18074 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
ERCC2P18074 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ERCC2P18074 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
ERCC2P18074 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.09■□□□□ 0.17
ERCC2P18074 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ERCC2P18074 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ERCC2P18074 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ERCC2P18074 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.09■□□□□ 0.17
ERCC2P18074 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.09■□□□□ 0.17
ERCC2P18074 KRT18P43-201ENST00000469825 1281 ntBASIC16.09■□□□□ 0.17
ERCC2P18074 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.09■□□□□ 0.17
ERCC2P18074 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.09■□□□□ 0.17
ERCC2P18074 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.09■□□□□ 0.17
ERCC2P18074 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.09■□□□□ 0.17
ERCC2P18074 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.09■□□□□ 0.17
ERCC2P18074 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.09■□□□□ 0.17
ERCC2P18074 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ERCC2P18074 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.09■□□□□ 0.17
ERCC2P18074 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ERCC2P18074 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.09■□□□□ 0.17
ERCC2P18074 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
ERCC2P18074 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ERCC2P18074 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ERCC2P18074 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
ERCC2P18074 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
ERCC2P18074 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.08■□□□□ 0.17
ERCC2P18074 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
ERCC2P18074 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
ERCC2P18074 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.08■□□□□ 0.17
ERCC2P18074 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ERCC2P18074 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ERCC2P18074 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.08■□□□□ 0.16
ERCC2P18074 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms