Protein–RNA interactions for Protein: P0DP25

CALM3, Calmodulin-3, humanhuman

Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3P0DP25 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CALM3P0DP25 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CALM3P0DP25 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.12■□□□□ 0.49
CALM3P0DP25 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC18.12■□□□□ 0.49
CALM3P0DP25 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CALM3P0DP25 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CALM3P0DP25 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CALM3P0DP25 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.12■□□□□ 0.49
CALM3P0DP25 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CALM3P0DP25 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.12■□□□□ 0.49
CALM3P0DP25 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CALM3P0DP25 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CALM3P0DP25 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CALM3P0DP25 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CALM3P0DP25 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.12■□□□□ 0.49
CALM3P0DP25 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CALM3P0DP25 PFN2-205ENST00000461868 613 ntTSL 2 BASIC18.12■□□□□ 0.49
CALM3P0DP25 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CALM3P0DP25 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.12■□□□□ 0.49
CALM3P0DP25 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.12■□□□□ 0.49
CALM3P0DP25 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.12■□□□□ 0.49
CALM3P0DP25 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
CALM3P0DP25 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.12■□□□□ 0.49
CALM3P0DP25 BRI3BPP1-201ENST00000594224 787 ntBASIC18.12■□□□□ 0.49
CALM3P0DP25 CHCHD2P3-201ENST00000603038 451 ntBASIC18.12■□□□□ 0.49
CALM3P0DP25 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.12■□□□□ 0.49
CALM3P0DP25 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CALM3P0DP25 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC18.12■□□□□ 0.49
CALM3P0DP25 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CALM3P0DP25 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CALM3P0DP25 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CALM3P0DP25 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CALM3P0DP25 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CALM3P0DP25 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CALM3P0DP25 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
CALM3P0DP25 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CALM3P0DP25 AC112693.3-201ENST00000624819 1983 ntBASIC18.11■□□□□ 0.49
CALM3P0DP25 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CALM3P0DP25 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
CALM3P0DP25 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CALM3P0DP25 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CALM3P0DP25 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CALM3P0DP25 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CALM3P0DP25 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CALM3P0DP25 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CALM3P0DP25 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CALM3P0DP25 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CALM3P0DP25 AL442647.2-201ENST00000429864 857 ntBASIC18.11■□□□□ 0.49
CALM3P0DP25 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CALM3P0DP25 CRB3P1-201ENST00000449338 276 ntBASIC18.11■□□□□ 0.49
CALM3P0DP25 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.11■□□□□ 0.49
CALM3P0DP25 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.11■□□□□ 0.49
CALM3P0DP25 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.11■□□□□ 0.49
CALM3P0DP25 AL049840.4-201ENST00000602422 811 ntBASIC18.11■□□□□ 0.49
CALM3P0DP25 TMEM261P1-201ENST00000604899 340 ntBASIC18.11■□□□□ 0.49
CALM3P0DP25 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.11■□□□□ 0.49
CALM3P0DP25 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.11■□□□□ 0.49
CALM3P0DP25 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CALM3P0DP25 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CALM3P0DP25 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CALM3P0DP25 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.11■□□□□ 0.49
CALM3P0DP25 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CALM3P0DP25 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CALM3P0DP25 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CALM3P0DP25 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CALM3P0DP25 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.11■□□□□ 0.49
CALM3P0DP25 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CALM3P0DP25 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CALM3P0DP25 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CALM3P0DP25 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CALM3P0DP25 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.11■□□□□ 0.49
CALM3P0DP25 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CALM3P0DP25 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CALM3P0DP25 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.11■□□□□ 0.49
CALM3P0DP25 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CALM3P0DP25 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CALM3P0DP25 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CALM3P0DP25 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CALM3P0DP25 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CALM3P0DP25 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CALM3P0DP25 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CALM3P0DP25 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18.1■□□□□ 0.49
CALM3P0DP25 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CALM3P0DP25 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CALM3P0DP25 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CALM3P0DP25 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CALM3P0DP25 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
CALM3P0DP25 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC18.1■□□□□ 0.49
CALM3P0DP25 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CALM3P0DP25 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CALM3P0DP25 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CALM3P0DP25 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CALM3P0DP25 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CALM3P0DP25 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CALM3P0DP25 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CALM3P0DP25 NSL1-201ENST00000366976 722 ntTSL 2 BASIC18.1■□□□□ 0.49
CALM3P0DP25 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.1■□□□□ 0.49
CALM3P0DP25 MYCLP2-201ENST00000449268 967 ntBASIC18.1■□□□□ 0.49
CALM3P0DP25 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.1■□□□□ 0.49
CALM3P0DP25 TP53TG3HP-202ENST00000569755 579 ntBASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms