Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
RAB40ALP0C0E4 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAB40ALP0C0E4 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAB40ALP0C0E4 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.77□□□□□ -0.05
RAB40ALP0C0E4 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAB40ALP0C0E4 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAB40ALP0C0E4 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAB40ALP0C0E4 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
RAB40ALP0C0E4 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RAB40ALP0C0E4 AL607033.1-201ENST00000623900 1599 ntBASIC14.77□□□□□ -0.05
RAB40ALP0C0E4 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.77□□□□□ -0.05
RAB40ALP0C0E4 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 AC011477.6-201ENST00000604980 1927 ntBASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 AC018665.1-201ENST00000622927 1362 ntBASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 C1QBPP1-201ENST00000400117 770 ntBASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 AC104989.1-201ENST00000519711 778 ntBASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 PTP4A1P2-201ENST00000546033 454 ntBASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 AC009486.1-201ENST00000569860 813 ntBASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 HYMAI-201ENST00000635591 3347 ntBASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.76□□□□□ -0.05
RAB40ALP0C0E4 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAB40ALP0C0E4 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
RAB40ALP0C0E4 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RAB40ALP0C0E4 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.75□□□□□ -0.05
RAB40ALP0C0E4 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAB40ALP0C0E4 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.75□□□□□ -0.05
RAB40ALP0C0E4 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
RAB40ALP0C0E4 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RAB40ALP0C0E4 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.75□□□□□ -0.05
RAB40ALP0C0E4 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAB40ALP0C0E4 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAB40ALP0C0E4 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAB40ALP0C0E4 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
RAB40ALP0C0E4 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RAB40ALP0C0E4 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAB40ALP0C0E4 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.75□□□□□ -0.05
RAB40ALP0C0E4 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.75□□□□□ -0.05
RAB40ALP0C0E4 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.75□□□□□ -0.05
RAB40ALP0C0E4 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms