Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CAPN1P07384 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.49■□□□□ 0.07
CAPN1P07384 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
CAPN1P07384 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CAPN1P07384 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CAPN1P07384 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.49■□□□□ 0.07
CAPN1P07384 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CAPN1P07384 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CAPN1P07384 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CAPN1P07384 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.48■□□□□ 0.07
CAPN1P07384 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN1P07384 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN1P07384 AC023157.3-201ENST00000619086 2088 ntBASIC15.48■□□□□ 0.07
CAPN1P07384 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN1P07384 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN1P07384 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.48■□□□□ 0.07
CAPN1P07384 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.48■□□□□ 0.07
CAPN1P07384 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN1P07384 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN1P07384 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CAPN1P07384 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.48■□□□□ 0.07
CAPN1P07384 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN1P07384 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN1P07384 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN1P07384 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN1P07384 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CAPN1P07384 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN1P07384 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN1P07384 REXO1L1P-202ENST00000608646 1974 ntBASIC15.48■□□□□ 0.07
CAPN1P07384 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN1P07384 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN1P07384 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN1P07384 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
CAPN1P07384 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN1P07384 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN1P07384 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN1P07384 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CAPN1P07384 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
CAPN1P07384 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN1P07384 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN1P07384 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.48■□□□□ 0.07
CAPN1P07384 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CAPN1P07384 MRPS18AP1-201ENST00000414458 589 ntBASIC15.48■□□□□ 0.07
CAPN1P07384 AC241585.1-201ENST00000433527 519 ntBASIC15.48■□□□□ 0.07
CAPN1P07384 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CAPN1P07384 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.48■□□□□ 0.07
CAPN1P07384 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.48■□□□□ 0.07
CAPN1P07384 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.48■□□□□ 0.07
CAPN1P07384 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.48■□□□□ 0.07
CAPN1P07384 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.48■□□□□ 0.07
CAPN1P07384 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CAPN1P07384 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.48■□□□□ 0.07
CAPN1P07384 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.48■□□□□ 0.07
CAPN1P07384 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN1P07384 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.48■□□□□ 0.07
CAPN1P07384 SPDYE12P-201ENST00000618416 771 ntBASIC15.48■□□□□ 0.07
CAPN1P07384 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.48■□□□□ 0.07
CAPN1P07384 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.48■□□□□ 0.07
CAPN1P07384 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.48■□□□□ 0.07
CAPN1P07384 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN1P07384 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
CAPN1P07384 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN1P07384 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN1P07384 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN1P07384 AC100757.3-201ENST00000622361 1406 ntBASIC15.48■□□□□ 0.07
CAPN1P07384 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN1P07384 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN1P07384 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.48■□□□□ 0.07
CAPN1P07384 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN1P07384 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
CAPN1P07384 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.48■□□□□ 0.07
CAPN1P07384 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN1P07384 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN1P07384 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.48■□□□□ 0.07
CAPN1P07384 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.48■□□□□ 0.07
CAPN1P07384 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CAPN1P07384 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CAPN1P07384 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN1P07384 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN1P07384 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN1P07384 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CAPN1P07384 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.47■□□□□ 0.07
CAPN1P07384 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CAPN1P07384 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CAPN1P07384 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.47■□□□□ 0.07
CAPN1P07384 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.47■□□□□ 0.07
CAPN1P07384 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CAPN1P07384 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CAPN1P07384 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CAPN1P07384 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CAPN1P07384 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CAPN1P07384 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CAPN1P07384 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
CAPN1P07384 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CAPN1P07384 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CAPN1P07384 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
CAPN1P07384 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CAPN1P07384 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.47■□□□□ 0.07
CAPN1P07384 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.47■□□□□ 0.07
CAPN1P07384 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms