Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
COL5A2P05997 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
COL5A2P05997 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL5A2P05997 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL5A2P05997 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
COL5A2P05997 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL5A2P05997 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC20.11■□□□□ 0.81
COL5A2P05997 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
COL5A2P05997 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL5A2P05997 AL805961.1-201ENST00000642026 753 ntBASIC20.11■□□□□ 0.81
COL5A2P05997 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL5A2P05997 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL5A2P05997 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL5A2P05997 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL5A2P05997 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
COL5A2P05997 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL5A2P05997 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL5A2P05997 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL5A2P05997 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC20.11■□□□□ 0.81
COL5A2P05997 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL5A2P05997 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC20.11■□□□□ 0.81
COL5A2P05997 ILF3-AS1-201ENST00000591501 1983 ntBASIC20.11■□□□□ 0.81
COL5A2P05997 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL5A2P05997 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC20.11■□□□□ 0.81
COL5A2P05997 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC20.11■□□□□ 0.81
COL5A2P05997 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL5A2P05997 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC20.11■□□□□ 0.81
COL5A2P05997 LINC02447-202ENST00000501888 2146 ntBASIC20.11■□□□□ 0.81
COL5A2P05997 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
COL5A2P05997 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL5A2P05997 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
COL5A2P05997 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC20.11■□□□□ 0.81
COL5A2P05997 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC20.11■□□□□ 0.81
COL5A2P05997 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC20.11■□□□□ 0.81
COL5A2P05997 IRF3-215ENST00000596822 823 ntTSL 3 BASIC20.11■□□□□ 0.81
COL5A2P05997 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC20.11■□□□□ 0.81
COL5A2P05997 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
COL5A2P05997 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC20.1■□□□□ 0.81
COL5A2P05997 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL5A2P05997 AC127383.1-201ENST00000444697 1800 ntBASIC20.1■□□□□ 0.81
COL5A2P05997 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
COL5A2P05997 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL5A2P05997 INE2-201ENST00000630399 1874 ntBASIC20.1■□□□□ 0.81
COL5A2P05997 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL5A2P05997 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL5A2P05997 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL5A2P05997 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL5A2P05997 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.1■□□□□ 0.81
COL5A2P05997 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL5A2P05997 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
COL5A2P05997 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL5A2P05997 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC20.1■□□□□ 0.81
COL5A2P05997 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC20.1■□□□□ 0.81
COL5A2P05997 CDC23-208ENST00000505120 455 ntTSL 3 BASIC20.1■□□□□ 0.81
COL5A2P05997 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC20.1■□□□□ 0.81
COL5A2P05997 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
COL5A2P05997 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL5A2P05997 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC20.1■□□□□ 0.81
COL5A2P05997 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC20.1■□□□□ 0.81
COL5A2P05997 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL5A2P05997 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL5A2P05997 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
COL5A2P05997 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
COL5A2P05997 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC20.1■□□□□ 0.81
COL5A2P05997 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL5A2P05997 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
COL5A2P05997 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL5A2P05997 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL5A2P05997 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL5A2P05997 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
COL5A2P05997 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL5A2P05997 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC20.09■□□□□ 0.81
COL5A2P05997 REXO1L5P-201ENST00000622260 2098 ntBASIC20.09■□□□□ 0.81
COL5A2P05997 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL5A2P05997 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL5A2P05997 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL5A2P05997 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL5A2P05997 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL5A2P05997 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC20.09■□□□□ 0.81
COL5A2P05997 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL5A2P05997 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
COL5A2P05997 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC20.09■□□□□ 0.81
COL5A2P05997 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC20.09■□□□□ 0.81
COL5A2P05997 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
COL5A2P05997 HLA-C-210ENST00000640219 976 ntBASIC20.09■□□□□ 0.81
COL5A2P05997 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL5A2P05997 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL5A2P05997 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL5A2P05997 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL5A2P05997 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
COL5A2P05997 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.09■□□□□ 0.81
COL5A2P05997 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL5A2P05997 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL5A2P05997 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL5A2P05997 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL5A2P05997 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL5A2P05997 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
COL5A2P05997 AC011840.2-201ENST00000563063 1520 ntBASIC20.08■□□□□ 0.81
COL5A2P05997 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COL5A2P05997 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms