Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR3DP05423 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
POLR3DP05423 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
POLR3DP05423 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR3DP05423 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
POLR3DP05423 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR3DP05423 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR3DP05423 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC18.72■□□□□ 0.59
POLR3DP05423 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR3DP05423 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR3DP05423 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
POLR3DP05423 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
POLR3DP05423 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.72■□□□□ 0.59
POLR3DP05423 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.72■□□□□ 0.59
POLR3DP05423 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLR3DP05423 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLR3DP05423 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
POLR3DP05423 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
POLR3DP05423 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLR3DP05423 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLR3DP05423 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.71■□□□□ 0.59
POLR3DP05423 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.71■□□□□ 0.59
POLR3DP05423 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.71■□□□□ 0.59
POLR3DP05423 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
POLR3DP05423 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.71■□□□□ 0.59
POLR3DP05423 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
POLR3DP05423 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLR3DP05423 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
POLR3DP05423 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLR3DP05423 TTTY23B-201ENST00000442790 549 ntBASIC18.71■□□□□ 0.59
POLR3DP05423 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
POLR3DP05423 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.71■□□□□ 0.59
POLR3DP05423 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.71■□□□□ 0.59
POLR3DP05423 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC18.71■□□□□ 0.59
POLR3DP05423 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.71■□□□□ 0.59
POLR3DP05423 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
POLR3DP05423 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
POLR3DP05423 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLR3DP05423 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLR3DP05423 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.71■□□□□ 0.59
POLR3DP05423 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLR3DP05423 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
POLR3DP05423 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
POLR3DP05423 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR3DP05423 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR3DP05423 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR3DP05423 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR3DP05423 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR3DP05423 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR3DP05423 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR3DP05423 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.7■□□□□ 0.58
POLR3DP05423 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.7■□□□□ 0.58
POLR3DP05423 PGF-202ENST00000405431 666 ntTSL 5 BASIC18.7■□□□□ 0.58
POLR3DP05423 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR3DP05423 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.7■□□□□ 0.58
POLR3DP05423 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
POLR3DP05423 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR3DP05423 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.7■□□□□ 0.58
POLR3DP05423 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.7■□□□□ 0.58
POLR3DP05423 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
POLR3DP05423 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.7■□□□□ 0.58
POLR3DP05423 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.7■□□□□ 0.58
POLR3DP05423 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.7■□□□□ 0.58
POLR3DP05423 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.7■□□□□ 0.58
POLR3DP05423 AC133539.2-201ENST00000604757 467 ntBASIC18.7■□□□□ 0.58
POLR3DP05423 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.7■□□□□ 0.58
POLR3DP05423 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.7■□□□□ 0.58
POLR3DP05423 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR3DP05423 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
POLR3DP05423 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR3DP05423 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR3DP05423 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
POLR3DP05423 TSPY26P-202ENST00000565928 3884 ntBASIC18.7■□□□□ 0.58
POLR3DP05423 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR3DP05423 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR3DP05423 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
POLR3DP05423 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR3DP05423 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
POLR3DP05423 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.69■□□□□ 0.58
POLR3DP05423 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC18.69■□□□□ 0.58
POLR3DP05423 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR3DP05423 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR3DP05423 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR3DP05423 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
POLR3DP05423 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
POLR3DP05423 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR3DP05423 AL442647.2-201ENST00000429864 857 ntBASIC18.69■□□□□ 0.58
POLR3DP05423 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.69■□□□□ 0.58
POLR3DP05423 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.69■□□□□ 0.58
POLR3DP05423 MIR4313-201ENST00000580760 101 ntBASIC18.69■□□□□ 0.58
POLR3DP05423 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.69■□□□□ 0.58
POLR3DP05423 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.69■□□□□ 0.58
POLR3DP05423 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
POLR3DP05423 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.69■□□□□ 0.58
POLR3DP05423 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.69■□□□□ 0.58
POLR3DP05423 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.69■□□□□ 0.58
POLR3DP05423 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
POLR3DP05423 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.69■□□□□ 0.58
POLR3DP05423 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR3DP05423 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms