Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHGBP05060 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CHGBP05060 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC18.71■□□□□ 0.59
CHGBP05060 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHGBP05060 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHGBP05060 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHGBP05060 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18.71■□□□□ 0.59
CHGBP05060 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHGBP05060 AC005034.1-201ENST00000426657 489 ntBASIC18.71■□□□□ 0.59
CHGBP05060 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.71■□□□□ 0.59
CHGBP05060 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.71■□□□□ 0.59
CHGBP05060 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.71■□□□□ 0.59
CHGBP05060 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.71■□□□□ 0.59
CHGBP05060 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.71■□□□□ 0.59
CHGBP05060 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CHGBP05060 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CHGBP05060 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
CHGBP05060 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CHGBP05060 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC18.71■□□□□ 0.59
CHGBP05060 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHGBP05060 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CHGBP05060 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC18.71■□□□□ 0.59
CHGBP05060 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.71■□□□□ 0.59
CHGBP05060 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC18.71■□□□□ 0.59
CHGBP05060 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC18.71■□□□□ 0.59
CHGBP05060 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CHGBP05060 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC18.71■□□□□ 0.59
CHGBP05060 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHGBP05060 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
CHGBP05060 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC18.7■□□□□ 0.58
CHGBP05060 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHGBP05060 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHGBP05060 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHGBP05060 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHGBP05060 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHGBP05060 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC18.7■□□□□ 0.58
CHGBP05060 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHGBP05060 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHGBP05060 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHGBP05060 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHGBP05060 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHGBP05060 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHGBP05060 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHGBP05060 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CHGBP05060 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHGBP05060 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHGBP05060 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
CHGBP05060 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.7■□□□□ 0.58
CHGBP05060 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHGBP05060 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.7■□□□□ 0.58
CHGBP05060 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHGBP05060 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHGBP05060 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHGBP05060 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CHGBP05060 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC18.7■□□□□ 0.58
CHGBP05060 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC18.7■□□□□ 0.58
CHGBP05060 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.7■□□□□ 0.58
CHGBP05060 RN7SL752P-201ENST00000463779 287 ntBASIC18.7■□□□□ 0.58
CHGBP05060 AC026410.3-201ENST00000514280 936 ntBASIC18.7■□□□□ 0.58
CHGBP05060 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHGBP05060 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC18.7■□□□□ 0.58
CHGBP05060 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC18.7■□□□□ 0.58
CHGBP05060 AC120045.2-201ENST00000567334 178 ntBASIC18.7■□□□□ 0.58
CHGBP05060 CLUHP6-201ENST00000580789 941 ntBASIC18.7■□□□□ 0.58
CHGBP05060 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.7■□□□□ 0.58
CHGBP05060 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CHGBP05060 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC18.7■□□□□ 0.58
CHGBP05060 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC18.7■□□□□ 0.58
CHGBP05060 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CHGBP05060 AC005252.2-201ENST00000624630 1141 ntBASIC18.7■□□□□ 0.58
CHGBP05060 AL033527.5-201ENST00000641382 801 ntBASIC18.7■□□□□ 0.58
CHGBP05060 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC18.7■□□□□ 0.58
CHGBP05060 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CHGBP05060 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.7■□□□□ 0.58
CHGBP05060 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHGBP05060 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHGBP05060 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHGBP05060 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.7■□□□□ 0.58
CHGBP05060 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHGBP05060 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHGBP05060 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHGBP05060 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHGBP05060 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC18.69■□□□□ 0.58
CHGBP05060 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CHGBP05060 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHGBP05060 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CHGBP05060 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHGBP05060 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CHGBP05060 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CHGBP05060 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.69■□□□□ 0.58
CHGBP05060 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CHGBP05060 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CHGBP05060 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC18.69■□□□□ 0.58
CHGBP05060 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHGBP05060 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.69■□□□□ 0.58
CHGBP05060 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHGBP05060 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC18.69■□□□□ 0.58
CHGBP05060 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHGBP05060 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHGBP05060 AP006294.1-201ENST00000415407 339 ntBASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms