Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
GAPDHP04406 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
GAPDHP04406 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
GAPDHP04406 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GAPDHP04406 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
GAPDHP04406 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.18□□□□□ -0.3
GAPDHP04406 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
GAPDHP04406 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GAPDHP04406 AC090616.6-203ENST00000579186 1945 ntBASIC13.18□□□□□ -0.3
GAPDHP04406 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GAPDHP04406 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GAPDHP04406 AGAP7P-201ENST00000582299 2062 ntBASIC13.18□□□□□ -0.3
GAPDHP04406 AGAP14-201ENST00000624701 2060 ntBASIC13.18□□□□□ -0.3
GAPDHP04406 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.18□□□□□ -0.3
GAPDHP04406 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GAPDHP04406 KRT18P13-201ENST00000400056 1290 ntBASIC13.18□□□□□ -0.3
GAPDHP04406 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.18□□□□□ -0.3
GAPDHP04406 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.18□□□□□ -0.3
GAPDHP04406 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.18□□□□□ -0.3
GAPDHP04406 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
GAPDHP04406 AP000344.2-201ENST00000512987 629 ntBASIC13.18□□□□□ -0.3
GAPDHP04406 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.18□□□□□ -0.3
GAPDHP04406 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.18□□□□□ -0.3
GAPDHP04406 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.18□□□□□ -0.3
GAPDHP04406 LINC01225-203ENST00000563550 1244 ntBASIC13.18□□□□□ -0.3
GAPDHP04406 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
GAPDHP04406 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GAPDHP04406 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.18□□□□□ -0.3
GAPDHP04406 WDR88-203ENST00000592765 651 ntTSL 5 BASIC13.18□□□□□ -0.3
GAPDHP04406 AC055717.3-201ENST00000622967 595 ntBASIC13.18□□□□□ -0.3
GAPDHP04406 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GAPDHP04406 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
GAPDHP04406 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.18□□□□□ -0.3
GAPDHP04406 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
GAPDHP04406 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GAPDHP04406 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.18□□□□□ -0.3
GAPDHP04406 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GAPDHP04406 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.18□□□□□ -0.3
GAPDHP04406 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.18□□□□□ -0.3
GAPDHP04406 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
GAPDHP04406 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GAPDHP04406 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
GAPDHP04406 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GAPDHP04406 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GAPDHP04406 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GAPDHP04406 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GAPDHP04406 AC112693.3-201ENST00000624819 1983 ntBASIC13.18□□□□□ -0.3
GAPDHP04406 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
GAPDHP04406 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GAPDHP04406 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.18□□□□□ -0.3
GAPDHP04406 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GAPDHP04406 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GAPDHP04406 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.18□□□□□ -0.3
GAPDHP04406 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.18□□□□□ -0.3
GAPDHP04406 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GAPDHP04406 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GAPDHP04406 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
GAPDHP04406 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
GAPDHP04406 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GAPDHP04406 AC105250.1-201ENST00000509378 2057 ntBASIC13.17□□□□□ -0.3
GAPDHP04406 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
GAPDHP04406 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GAPDHP04406 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GAPDHP04406 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GAPDHP04406 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GAPDHP04406 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.17□□□□□ -0.3
GAPDHP04406 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.17□□□□□ -0.3
GAPDHP04406 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GAPDHP04406 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
GAPDHP04406 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.17□□□□□ -0.3
GAPDHP04406 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GAPDHP04406 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GAPDHP04406 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GAPDHP04406 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GAPDHP04406 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GAPDHP04406 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GAPDHP04406 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
GAPDHP04406 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GAPDHP04406 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GAPDHP04406 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.17□□□□□ -0.3
GAPDHP04406 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GAPDHP04406 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GAPDHP04406 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.17□□□□□ -0.3
GAPDHP04406 HAUS4P1-201ENST00000406739 1145 ntBASIC13.17□□□□□ -0.3
GAPDHP04406 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GAPDHP04406 RNA5SP410-201ENST00000516285 106 ntBASIC13.17□□□□□ -0.3
GAPDHP04406 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.17□□□□□ -0.3
GAPDHP04406 AC022145.2-201ENST00000598203 171 ntBASIC13.17□□□□□ -0.3
GAPDHP04406 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.17□□□□□ -0.3
GAPDHP04406 AC004835.2-201ENST00000603762 682 ntBASIC13.17□□□□□ -0.3
GAPDHP04406 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.17□□□□□ -0.3
GAPDHP04406 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
GAPDHP04406 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
GAPDHP04406 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GAPDHP04406 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GAPDHP04406 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.17□□□□□ -0.3
GAPDHP04406 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GAPDHP04406 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
GAPDHP04406 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
GAPDHP04406 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms