Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 TUBB8P8-201ENST00000458717 1058 ntBASIC9.47□□□□□ -0.89
APOBP04114 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC9.47□□□□□ -0.89
APOBP04114 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
APOBP04114 CMC2-224ENST00000630396 481 ntTSL 5 BASIC9.47□□□□□ -0.89
APOBP04114 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC9.47□□□□□ -0.89
APOBP04114 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
APOBP04114 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC9.47□□□□□ -0.89
APOBP04114 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC9.47□□□□□ -0.89
APOBP04114 AC055811.4-201ENST00000624039 1754 ntBASIC9.47□□□□□ -0.89
APOBP04114 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC9.47□□□□□ -0.89
APOBP04114 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
APOBP04114 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
APOBP04114 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
APOBP04114 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
APOBP04114 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
APOBP04114 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
APOBP04114 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
APOBP04114 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC9.47□□□□□ -0.89
APOBP04114 AQP7P5-201ENST00000428759 1049 ntBASIC9.47□□□□□ -0.89
APOBP04114 AQP7P4-201ENST00000447083 1042 ntBASIC9.47□□□□□ -0.89
APOBP04114 AQP7P2-201ENST00000453967 1041 ntBASIC9.47□□□□□ -0.89
APOBP04114 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC9.47□□□□□ -0.89
APOBP04114 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC9.47□□□□□ -0.89
APOBP04114 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC9.47□□□□□ -0.89
APOBP04114 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC9.47□□□□□ -0.89
APOBP04114 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC9.47□□□□□ -0.89
APOBP04114 AQP7P3-201ENST00000624547 1041 ntBASIC9.47□□□□□ -0.89
APOBP04114 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC9.47□□□□□ -0.89
APOBP04114 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
APOBP04114 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
APOBP04114 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.89
APOBP04114 AC005332.8-201ENST00000622750 2735 ntBASIC9.47□□□□□ -0.89
APOBP04114 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
APOBP04114 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
APOBP04114 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC9.47□□□□□ -0.89
APOBP04114 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC9.47□□□□□ -0.89
APOBP04114 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC9.47□□□□□ -0.89
APOBP04114 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
APOBP04114 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC9.47□□□□□ -0.89
APOBP04114 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.89
APOBP04114 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC9.46□□□□□ -0.89
APOBP04114 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
APOBP04114 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.89
APOBP04114 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC9.46□□□□□ -0.89
APOBP04114 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC9.46□□□□□ -0.89
APOBP04114 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
APOBP04114 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.89
APOBP04114 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
APOBP04114 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
APOBP04114 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC9.46□□□□□ -0.89
APOBP04114 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
APOBP04114 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
APOBP04114 AC007292.2-201ENST00000593524 1812 ntBASIC9.46□□□□□ -0.89
APOBP04114 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC9.46□□□□□ -0.89
APOBP04114 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
APOBP04114 AL359258.3-201ENST00000622910 2331 ntBASIC9.46□□□□□ -0.89
APOBP04114 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
APOBP04114 NDUFAB1P1-201ENST00000404262 460 ntBASIC9.46□□□□□ -0.89
APOBP04114 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
APOBP04114 MRPL22P1-201ENST00000505398 616 ntBASIC9.46□□□□□ -0.89
APOBP04114 DNM1P51-201ENST00000558149 522 ntBASIC9.46□□□□□ -0.89
APOBP04114 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC9.46□□□□□ -0.89
APOBP04114 AC107464.3-201ENST00000609172 737 ntBASIC9.46□□□□□ -0.89
APOBP04114 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
APOBP04114 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
APOBP04114 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
APOBP04114 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC9.46□□□□□ -0.89
APOBP04114 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
APOBP04114 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC9.46□□□□□ -0.89
APOBP04114 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC9.46□□□□□ -0.9
APOBP04114 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
APOBP04114 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
APOBP04114 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC9.46□□□□□ -0.9
APOBP04114 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
APOBP04114 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
APOBP04114 AC078875.1-201ENST00000431907 724 ntBASIC9.46□□□□□ -0.9
APOBP04114 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC9.46□□□□□ -0.9
APOBP04114 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC9.46□□□□□ -0.9
APOBP04114 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC9.46□□□□□ -0.9
APOBP04114 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
APOBP04114 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC9.46□□□□□ -0.9
APOBP04114 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
APOBP04114 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
APOBP04114 AC006449.5-201ENST00000610658 2098 ntBASIC9.46□□□□□ -0.9
APOBP04114 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC9.46□□□□□ -0.9
APOBP04114 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
APOBP04114 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC9.46□□□□□ -0.9
APOBP04114 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC9.46□□□□□ -0.9
APOBP04114 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC9.46□□□□□ -0.9
APOBP04114 RBM8B-201ENST00000555532 525 ntBASIC9.46□□□□□ -0.9
APOBP04114 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC9.46□□□□□ -0.9
APOBP04114 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.9
APOBP04114 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC9.46□□□□□ -0.9
APOBP04114 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
APOBP04114 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
APOBP04114 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
APOBP04114 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
APOBP04114 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC9.46□□□□□ -0.9
APOBP04114 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
APOBP04114 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms