Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
OPN1SWP03999 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
OPN1SWP03999 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
OPN1SWP03999 FDX1P1-201ENST00000449115 551 ntBASIC14.69□□□□□ -0.06
OPN1SWP03999 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
OPN1SWP03999 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.69□□□□□ -0.06
OPN1SWP03999 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
OPN1SWP03999 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.69□□□□□ -0.06
OPN1SWP03999 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
OPN1SWP03999 AC026120.1-201ENST00000611536 926 ntBASIC14.69□□□□□ -0.06
OPN1SWP03999 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.69□□□□□ -0.06
OPN1SWP03999 UXT-AS1-201ENST00000590504 1525 ntBASIC14.69□□□□□ -0.06
OPN1SWP03999 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
OPN1SWP03999 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
OPN1SWP03999 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
OPN1SWP03999 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.69□□□□□ -0.06
OPN1SWP03999 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.69□□□□□ -0.06
OPN1SWP03999 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
OPN1SWP03999 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.69□□□□□ -0.06
OPN1SWP03999 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
OPN1SWP03999 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
OPN1SWP03999 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
OPN1SWP03999 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
OPN1SWP03999 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
OPN1SWP03999 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.69□□□□□ -0.06
OPN1SWP03999 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
OPN1SWP03999 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
OPN1SWP03999 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
OPN1SWP03999 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
OPN1SWP03999 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
OPN1SWP03999 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
OPN1SWP03999 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
OPN1SWP03999 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
OPN1SWP03999 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
OPN1SWP03999 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
OPN1SWP03999 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
OPN1SWP03999 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
OPN1SWP03999 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
OPN1SWP03999 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
OPN1SWP03999 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
OPN1SWP03999 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
OPN1SWP03999 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
OPN1SWP03999 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.68□□□□□ -0.06
OPN1SWP03999 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.68□□□□□ -0.06
OPN1SWP03999 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
OPN1SWP03999 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.68□□□□□ -0.06
OPN1SWP03999 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
OPN1SWP03999 FAM45BP-202ENST00000592932 1624 ntBASIC14.68□□□□□ -0.06
OPN1SWP03999 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
OPN1SWP03999 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
OPN1SWP03999 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
OPN1SWP03999 MIR346-201ENST00000362234 95 ntBASIC14.68□□□□□ -0.06
OPN1SWP03999 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.68□□□□□ -0.06
OPN1SWP03999 MIR940-201ENST00000401276 94 ntBASIC14.68□□□□□ -0.06
OPN1SWP03999 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.68□□□□□ -0.06
OPN1SWP03999 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
OPN1SWP03999 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.68□□□□□ -0.06
OPN1SWP03999 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.68□□□□□ -0.06
OPN1SWP03999 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.68□□□□□ -0.06
OPN1SWP03999 SLC25A39P2-201ENST00000537614 270 ntBASIC14.68□□□□□ -0.06
OPN1SWP03999 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.68□□□□□ -0.06
OPN1SWP03999 LINC01225-203ENST00000563550 1244 ntBASIC14.68□□□□□ -0.06
OPN1SWP03999 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.68□□□□□ -0.06
OPN1SWP03999 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
OPN1SWP03999 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
OPN1SWP03999 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
OPN1SWP03999 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.68□□□□□ -0.06
OPN1SWP03999 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
OPN1SWP03999 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
OPN1SWP03999 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
OPN1SWP03999 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
OPN1SWP03999 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
OPN1SWP03999 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
OPN1SWP03999 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.68□□□□□ -0.06
OPN1SWP03999 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
OPN1SWP03999 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
OPN1SWP03999 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.68□□□□□ -0.06
OPN1SWP03999 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.68□□□□□ -0.06
OPN1SWP03999 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
OPN1SWP03999 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
OPN1SWP03999 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
OPN1SWP03999 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
OPN1SWP03999 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
OPN1SWP03999 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
OPN1SWP03999 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
OPN1SWP03999 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
OPN1SWP03999 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
OPN1SWP03999 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
OPN1SWP03999 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
OPN1SWP03999 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
OPN1SWP03999 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
OPN1SWP03999 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.67□□□□□ -0.06
OPN1SWP03999 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.67□□□□□ -0.06
OPN1SWP03999 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
OPN1SWP03999 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
OPN1SWP03999 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
OPN1SWP03999 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
OPN1SWP03999 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
OPN1SWP03999 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
OPN1SWP03999 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms