Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOC1P02654 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.94□□□□□ -0.18
APOC1P02654 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
APOC1P02654 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.94□□□□□ -0.18
APOC1P02654 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.94□□□□□ -0.18
APOC1P02654 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.94□□□□□ -0.18
APOC1P02654 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
APOC1P02654 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.94□□□□□ -0.18
APOC1P02654 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOC1P02654 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOC1P02654 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOC1P02654 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOC1P02654 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
APOC1P02654 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
APOC1P02654 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOC1P02654 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.94□□□□□ -0.18
APOC1P02654 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOC1P02654 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.94□□□□□ -0.18
APOC1P02654 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.94□□□□□ -0.18
APOC1P02654 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOC1P02654 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOC1P02654 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.94□□□□□ -0.18
APOC1P02654 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.94□□□□□ -0.18
APOC1P02654 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.94□□□□□ -0.18
APOC1P02654 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOC1P02654 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
APOC1P02654 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOC1P02654 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.93□□□□□ -0.18
APOC1P02654 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.93□□□□□ -0.18
APOC1P02654 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOC1P02654 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOC1P02654 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOC1P02654 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOC1P02654 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOC1P02654 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOC1P02654 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.93□□□□□ -0.18
APOC1P02654 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.93□□□□□ -0.18
APOC1P02654 KRT8P37-201ENST00000451609 1420 ntBASIC13.93□□□□□ -0.18
APOC1P02654 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
APOC1P02654 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOC1P02654 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.93□□□□□ -0.18
APOC1P02654 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
APOC1P02654 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOC1P02654 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOC1P02654 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOC1P02654 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC13.93□□□□□ -0.18
APOC1P02654 AL353705.2-201ENST00000428243 662 ntBASIC13.93□□□□□ -0.18
APOC1P02654 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.93□□□□□ -0.18
APOC1P02654 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.93□□□□□ -0.18
APOC1P02654 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.93□□□□□ -0.18
APOC1P02654 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.93□□□□□ -0.18
APOC1P02654 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.93□□□□□ -0.18
APOC1P02654 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.93□□□□□ -0.18
APOC1P02654 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.93□□□□□ -0.18
APOC1P02654 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.93□□□□□ -0.18
APOC1P02654 AC005829.1-201ENST00000570002 483 ntBASIC13.93□□□□□ -0.18
APOC1P02654 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.93□□□□□ -0.18
APOC1P02654 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.93□□□□□ -0.18
APOC1P02654 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.93□□□□□ -0.18
APOC1P02654 AL450472.2-201ENST00000603663 1156 ntBASIC13.93□□□□□ -0.18
APOC1P02654 AC087386.2-201ENST00000623212 4637 ntBASIC13.93□□□□□ -0.18
APOC1P02654 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOC1P02654 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
APOC1P02654 AP003680.1-201ENST00000598970 3660 ntBASIC13.93□□□□□ -0.18
APOC1P02654 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
APOC1P02654 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOC1P02654 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOC1P02654 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOC1P02654 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.93□□□□□ -0.18
APOC1P02654 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
APOC1P02654 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC1P02654 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC1P02654 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC1P02654 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC1P02654 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
APOC1P02654 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC1P02654 ELL2P1-201ENST00000413990 1906 ntBASIC13.92□□□□□ -0.18
APOC1P02654 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.92□□□□□ -0.18
APOC1P02654 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.92□□□□□ -0.18
APOC1P02654 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC1P02654 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.92□□□□□ -0.18
APOC1P02654 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.92□□□□□ -0.18
APOC1P02654 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.92□□□□□ -0.18
APOC1P02654 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
APOC1P02654 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.92□□□□□ -0.18
APOC1P02654 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.92□□□□□ -0.18
APOC1P02654 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC1P02654 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC1P02654 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC1P02654 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC1P02654 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.92□□□□□ -0.18
APOC1P02654 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC13.92□□□□□ -0.18
APOC1P02654 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
APOC1P02654 CBFB-203ENST00000561924 584 ntTSL 5 BASIC13.92□□□□□ -0.18
APOC1P02654 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
APOC1P02654 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC1P02654 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.92□□□□□ -0.18
APOC1P02654 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC13.92□□□□□ -0.18
APOC1P02654 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
APOC1P02654 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms