Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDKL5O76039 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDKL5O76039 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.22■□□□□ 0.51
CDKL5O76039 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC18.21■□□□□ 0.51
CDKL5O76039 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDKL5O76039 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDKL5O76039 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDKL5O76039 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC18.21■□□□□ 0.51
CDKL5O76039 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDKL5O76039 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDKL5O76039 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDKL5O76039 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.21■□□□□ 0.51
CDKL5O76039 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDKL5O76039 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.21■□□□□ 0.51
CDKL5O76039 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.21■□□□□ 0.51
CDKL5O76039 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC18.21■□□□□ 0.51
CDKL5O76039 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.21■□□□□ 0.51
CDKL5O76039 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.21■□□□□ 0.51
CDKL5O76039 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.21■□□□□ 0.51
CDKL5O76039 LINC01115-203ENST00000606068 577 ntBASIC18.21■□□□□ 0.51
CDKL5O76039 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.21■□□□□ 0.51
CDKL5O76039 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
CDKL5O76039 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDKL5O76039 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC18.21■□□□□ 0.51
CDKL5O76039 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDKL5O76039 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDKL5O76039 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDKL5O76039 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDKL5O76039 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CDKL5O76039 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC18.21■□□□□ 0.51
CDKL5O76039 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDKL5O76039 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDKL5O76039 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDKL5O76039 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.21■□□□□ 0.51
CDKL5O76039 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDKL5O76039 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDKL5O76039 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CDKL5O76039 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKL5O76039 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKL5O76039 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CDKL5O76039 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CDKL5O76039 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
CDKL5O76039 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKL5O76039 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.2■□□□□ 0.5
CDKL5O76039 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKL5O76039 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
CDKL5O76039 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC18.2■□□□□ 0.5
CDKL5O76039 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKL5O76039 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKL5O76039 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKL5O76039 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKL5O76039 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CDKL5O76039 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKL5O76039 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDKL5O76039 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDKL5O76039 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CDKL5O76039 TOMM22P5-201ENST00000416399 439 ntBASIC18.2■□□□□ 0.5
CDKL5O76039 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKL5O76039 KRT18P64-201ENST00000434946 1219 ntBASIC18.2■□□□□ 0.5
CDKL5O76039 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.2■□□□□ 0.5
CDKL5O76039 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.2■□□□□ 0.5
CDKL5O76039 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.2■□□□□ 0.5
CDKL5O76039 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CDKL5O76039 AC044860.1-202ENST00000559481 777 ntBASIC18.2■□□□□ 0.5
CDKL5O76039 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.2■□□□□ 0.5
CDKL5O76039 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.2■□□□□ 0.5
CDKL5O76039 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
CDKL5O76039 AF228730.6-201ENST00000641497 218 ntBASIC18.2■□□□□ 0.5
CDKL5O76039 AC084121.3-201ENST00000641716 218 ntBASIC18.2■□□□□ 0.5
CDKL5O76039 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CDKL5O76039 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CDKL5O76039 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKL5O76039 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKL5O76039 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKL5O76039 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKL5O76039 BTBD7P1-201ENST00000447253 1453 ntBASIC18.2■□□□□ 0.5
CDKL5O76039 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDKL5O76039 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.2■□□□□ 0.5
CDKL5O76039 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CDKL5O76039 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC18.19■□□□□ 0.5
CDKL5O76039 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDKL5O76039 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
CDKL5O76039 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CDKL5O76039 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDKL5O76039 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.19■□□□□ 0.5
CDKL5O76039 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CDKL5O76039 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDKL5O76039 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDKL5O76039 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDKL5O76039 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDKL5O76039 STRN-202ENST00000379213 2254 ntTSL 5 BASIC18.19■□□□□ 0.5
CDKL5O76039 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDKL5O76039 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CDKL5O76039 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDKL5O76039 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.19■□□□□ 0.5
CDKL5O76039 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDKL5O76039 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDKL5O76039 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC18.19■□□□□ 0.5
CDKL5O76039 AC055876.3-201ENST00000431496 288 ntBASIC18.19■□□□□ 0.5
CDKL5O76039 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms