Protein–RNA interactions for Protein: O75462

CRLF1, Cytokine receptor-like factor 1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF1O75462 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CRLF1O75462 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.61□□□□□ -0.39
CRLF1O75462 RN7SL774P-201ENST00000577467 290 ntBASIC12.61□□□□□ -0.39
CRLF1O75462 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC12.61□□□□□ -0.39
CRLF1O75462 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CRLF1O75462 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC12.61□□□□□ -0.39
CRLF1O75462 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC12.61□□□□□ -0.39
CRLF1O75462 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CRLF1O75462 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CRLF1O75462 AL023775.1-201ENST00000454907 1746 ntBASIC12.61□□□□□ -0.39
CRLF1O75462 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.61□□□□□ -0.39
CRLF1O75462 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CRLF1O75462 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CRLF1O75462 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CRLF1O75462 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CRLF1O75462 AC080080.1-201ENST00000625121 2420 ntBASIC12.61□□□□□ -0.39
CRLF1O75462 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.61□□□□□ -0.39
CRLF1O75462 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.61□□□□□ -0.39
CRLF1O75462 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC12.61□□□□□ -0.39
CRLF1O75462 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CRLF1O75462 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC12.61□□□□□ -0.39
CRLF1O75462 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CRLF1O75462 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CRLF1O75462 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CRLF1O75462 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CRLF1O75462 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CRLF1O75462 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.61□□□□□ -0.39
CRLF1O75462 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC12.61□□□□□ -0.39
CRLF1O75462 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CRLF1O75462 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CRLF1O75462 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CRLF1O75462 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CRLF1O75462 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CRLF1O75462 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CRLF1O75462 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CRLF1O75462 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CRLF1O75462 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CRLF1O75462 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CRLF1O75462 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CRLF1O75462 AC092850.2-201ENST00000623821 2697 ntBASIC12.6□□□□□ -0.39
CRLF1O75462 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CRLF1O75462 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CRLF1O75462 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.6□□□□□ -0.39
CRLF1O75462 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CRLF1O75462 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CRLF1O75462 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CRLF1O75462 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CRLF1O75462 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC12.6□□□□□ -0.39
CRLF1O75462 AC007274.2-201ENST00000421675 662 ntBASIC12.6□□□□□ -0.39
CRLF1O75462 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CRLF1O75462 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC12.6□□□□□ -0.39
CRLF1O75462 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC12.6□□□□□ -0.39
CRLF1O75462 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC12.6□□□□□ -0.39
CRLF1O75462 AL596276.2-201ENST00000447525 331 ntBASIC12.6□□□□□ -0.39
CRLF1O75462 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC12.6□□□□□ -0.39
CRLF1O75462 PHKG1P2-201ENST00000457537 863 ntBASIC12.6□□□□□ -0.39
CRLF1O75462 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC12.6□□□□□ -0.39
CRLF1O75462 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC12.6□□□□□ -0.39
CRLF1O75462 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.6□□□□□ -0.39
CRLF1O75462 MIR3147-201ENST00000577811 66 ntBASIC12.6□□□□□ -0.39
CRLF1O75462 RN7SL555P-201ENST00000584742 339 ntBASIC12.6□□□□□ -0.39
CRLF1O75462 KLK11-210ENST00000600362 759 ntTSL 3 BASIC12.6□□□□□ -0.39
CRLF1O75462 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CRLF1O75462 AC100757.4-201ENST00000626934 759 ntBASIC12.6□□□□□ -0.39
CRLF1O75462 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC12.6□□□□□ -0.39
CRLF1O75462 AC103702.1-201ENST00000548801 2630 ntBASIC12.6□□□□□ -0.39
CRLF1O75462 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CRLF1O75462 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CRLF1O75462 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CRLF1O75462 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CRLF1O75462 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CRLF1O75462 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CRLF1O75462 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CRLF1O75462 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC12.6□□□□□ -0.39
CRLF1O75462 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CRLF1O75462 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CRLF1O75462 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
CRLF1O75462 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
CRLF1O75462 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC12.6□□□□□ -0.39
CRLF1O75462 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC12.6□□□□□ -0.39
CRLF1O75462 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CRLF1O75462 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CRLF1O75462 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CRLF1O75462 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CRLF1O75462 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CRLF1O75462 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CRLF1O75462 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
CRLF1O75462 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CRLF1O75462 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CRLF1O75462 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CRLF1O75462 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CRLF1O75462 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC12.59□□□□□ -0.39
CRLF1O75462 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CRLF1O75462 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CRLF1O75462 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CRLF1O75462 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CRLF1O75462 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CRLF1O75462 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CRLF1O75462 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CRLF1O75462 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms