Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.69□□□□□ -0.06
TRIM3O75382 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM3O75382 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
TRIM3O75382 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM3O75382 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM3O75382 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM3O75382 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.69□□□□□ -0.06
TRIM3O75382 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM3O75382 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM3O75382 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM3O75382 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.68□□□□□ -0.06
TRIM3O75382 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.68□□□□□ -0.06
TRIM3O75382 CYP4F24P-201ENST00000586049 1580 ntBASIC14.68□□□□□ -0.06
TRIM3O75382 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM3O75382 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.68□□□□□ -0.06
TRIM3O75382 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
TRIM3O75382 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM3O75382 AL691432.1-201ENST00000596308 1422 ntBASIC14.68□□□□□ -0.06
TRIM3O75382 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
TRIM3O75382 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TRIM3O75382 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM3O75382 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM3O75382 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.68□□□□□ -0.06
TRIM3O75382 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.68□□□□□ -0.06
TRIM3O75382 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM3O75382 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TRIM3O75382 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM3O75382 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM3O75382 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.68□□□□□ -0.06
TRIM3O75382 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.68□□□□□ -0.06
TRIM3O75382 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM3O75382 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM3O75382 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM3O75382 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM3O75382 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM3O75382 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
TRIM3O75382 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.68□□□□□ -0.06
TRIM3O75382 MRPS18AP1-201ENST00000414458 589 ntBASIC14.68□□□□□ -0.06
TRIM3O75382 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.68□□□□□ -0.06
TRIM3O75382 AC009477.1-201ENST00000452936 217 ntBASIC14.68□□□□□ -0.06
TRIM3O75382 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.68□□□□□ -0.06
TRIM3O75382 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.68□□□□□ -0.06
TRIM3O75382 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.68□□□□□ -0.06
TRIM3O75382 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.68□□□□□ -0.06
TRIM3O75382 MIR4745-201ENST00000577608 62 ntBASIC14.68□□□□□ -0.06
TRIM3O75382 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.68□□□□□ -0.06
TRIM3O75382 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM3O75382 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM3O75382 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.68□□□□□ -0.06
TRIM3O75382 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM3O75382 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.68□□□□□ -0.06
TRIM3O75382 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
TRIM3O75382 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM3O75382 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM3O75382 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM3O75382 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM3O75382 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM3O75382 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM3O75382 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM3O75382 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM3O75382 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.68□□□□□ -0.06
TRIM3O75382 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM3O75382 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM3O75382 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
TRIM3O75382 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
TRIM3O75382 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM3O75382 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM3O75382 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM3O75382 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM3O75382 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.67□□□□□ -0.06
TRIM3O75382 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.67□□□□□ -0.06
TRIM3O75382 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.67□□□□□ -0.06
TRIM3O75382 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM3O75382 AC023157.3-201ENST00000619086 2088 ntBASIC14.67□□□□□ -0.06
TRIM3O75382 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM3O75382 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM3O75382 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.67□□□□□ -0.06
TRIM3O75382 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.67□□□□□ -0.06
TRIM3O75382 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.67□□□□□ -0.06
TRIM3O75382 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM3O75382 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.67□□□□□ -0.06
TRIM3O75382 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM3O75382 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM3O75382 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM3O75382 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM3O75382 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.67□□□□□ -0.06
TRIM3O75382 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.67□□□□□ -0.06
TRIM3O75382 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.67□□□□□ -0.06
TRIM3O75382 TSPY16P-201ENST00000449843 468 ntBASIC14.67□□□□□ -0.06
TRIM3O75382 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.67□□□□□ -0.06
TRIM3O75382 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.67□□□□□ -0.06
TRIM3O75382 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.67□□□□□ -0.06
TRIM3O75382 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM3O75382 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.67□□□□□ -0.06
TRIM3O75382 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM3O75382 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM3O75382 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.67□□□□□ -0.06
TRIM3O75382 AC022144.1-201ENST00000602255 1580 ntBASIC14.67□□□□□ -0.06
TRIM3O75382 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TRIM3O75382 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms