Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC12.85□□□□□ -0.35
SSSCA1O60232 AP000550.4-202ENST00000639755 178 ntBASIC12.85□□□□□ -0.35
SSSCA1O60232 AL645728.2-201ENST00000641974 660 ntBASIC12.85□□□□□ -0.35
SSSCA1O60232 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
SSSCA1O60232 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSSCA1O60232 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SSSCA1O60232 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSSCA1O60232 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSSCA1O60232 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC12.85□□□□□ -0.35
SSSCA1O60232 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC12.85□□□□□ -0.35
SSSCA1O60232 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC12.85□□□□□ -0.35
SSSCA1O60232 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSSCA1O60232 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSSCA1O60232 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
SSSCA1O60232 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSSCA1O60232 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.85□□□□□ -0.35
SSSCA1O60232 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SSSCA1O60232 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSSCA1O60232 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC12.85□□□□□ -0.35
SSSCA1O60232 PMS2P7-201ENST00000506558 1336 ntBASIC12.85□□□□□ -0.35
SSSCA1O60232 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SSSCA1O60232 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
SSSCA1O60232 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.85□□□□□ -0.35
SSSCA1O60232 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.85□□□□□ -0.35
SSSCA1O60232 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SSSCA1O60232 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
SSSCA1O60232 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SSSCA1O60232 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SSSCA1O60232 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC12.84□□□□□ -0.35
SSSCA1O60232 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SSSCA1O60232 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.84□□□□□ -0.35
SSSCA1O60232 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
SSSCA1O60232 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SSSCA1O60232 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC12.84□□□□□ -0.35
SSSCA1O60232 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SSSCA1O60232 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SSSCA1O60232 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SSSCA1O60232 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SSSCA1O60232 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SSSCA1O60232 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SSSCA1O60232 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
SSSCA1O60232 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
SSSCA1O60232 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.84□□□□□ -0.35
SSSCA1O60232 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.84□□□□□ -0.35
SSSCA1O60232 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SSSCA1O60232 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SSSCA1O60232 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SSSCA1O60232 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC12.84□□□□□ -0.35
SSSCA1O60232 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC12.84□□□□□ -0.35
SSSCA1O60232 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC12.84□□□□□ -0.35
SSSCA1O60232 HIST2H3DP1-201ENST00000401004 416 ntBASIC12.84□□□□□ -0.35
SSSCA1O60232 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC12.84□□□□□ -0.35
SSSCA1O60232 AL645939.2-201ENST00000427340 991 ntBASIC12.84□□□□□ -0.35
SSSCA1O60232 GPX1P2-201ENST00000429271 606 ntBASIC12.84□□□□□ -0.35
SSSCA1O60232 FIS1-203ENST00000442303 631 ntTSL 3 BASIC12.84□□□□□ -0.35
SSSCA1O60232 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SSSCA1O60232 AL513480.1-201ENST00000451731 511 ntBASIC12.84□□□□□ -0.35
SSSCA1O60232 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC12.84□□□□□ -0.35
SSSCA1O60232 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC12.84□□□□□ -0.35
SSSCA1O60232 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC12.84□□□□□ -0.35
SSSCA1O60232 ETFA-208ENST00000559602 792 ntTSL 3 BASIC12.84□□□□□ -0.35
SSSCA1O60232 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
SSSCA1O60232 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC12.84□□□□□ -0.35
SSSCA1O60232 MIR4313-201ENST00000580760 101 ntBASIC12.84□□□□□ -0.35
SSSCA1O60232 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC12.84□□□□□ -0.35
SSSCA1O60232 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC12.84□□□□□ -0.35
SSSCA1O60232 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC12.84□□□□□ -0.35
SSSCA1O60232 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SSSCA1O60232 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
SSSCA1O60232 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SSSCA1O60232 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SSSCA1O60232 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.84□□□□□ -0.35
SSSCA1O60232 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SSSCA1O60232 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SSSCA1O60232 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SSSCA1O60232 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
SSSCA1O60232 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SSSCA1O60232 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SSSCA1O60232 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SSSCA1O60232 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.84□□□□□ -0.35
SSSCA1O60232 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
SSSCA1O60232 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SSSCA1O60232 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC12.84□□□□□ -0.35
SSSCA1O60232 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SSSCA1O60232 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SSSCA1O60232 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
SSSCA1O60232 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
SSSCA1O60232 CICP14-201ENST00000629111 2732 ntBASIC12.83□□□□□ -0.35
SSSCA1O60232 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
SSSCA1O60232 ZBTB45P2-201ENST00000452245 1531 ntBASIC12.83□□□□□ -0.35
SSSCA1O60232 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.83□□□□□ -0.36
SSSCA1O60232 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSSCA1O60232 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.83□□□□□ -0.36
SSSCA1O60232 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSSCA1O60232 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC12.83□□□□□ -0.36
SSSCA1O60232 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSSCA1O60232 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC12.83□□□□□ -0.36
SSSCA1O60232 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSSCA1O60232 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSSCA1O60232 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms