Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
PDE6DO43924 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PDE6DO43924 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
PDE6DO43924 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC12.19□□□□□ -0.46
PDE6DO43924 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PDE6DO43924 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.19□□□□□ -0.46
PDE6DO43924 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC12.19□□□□□ -0.46
PDE6DO43924 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
PDE6DO43924 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
PDE6DO43924 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
PDE6DO43924 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
PDE6DO43924 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.19□□□□□ -0.46
PDE6DO43924 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PDE6DO43924 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
PDE6DO43924 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
PDE6DO43924 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
PDE6DO43924 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.19□□□□□ -0.46
PDE6DO43924 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PDE6DO43924 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PDE6DO43924 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC12.19□□□□□ -0.46
PDE6DO43924 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PDE6DO43924 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC12.19□□□□□ -0.46
PDE6DO43924 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
PDE6DO43924 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PDE6DO43924 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PDE6DO43924 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PDE6DO43924 AK4P3-201ENST00000418260 669 ntBASIC12.19□□□□□ -0.46
PDE6DO43924 DAP-202ENST00000432074 1048 ntTSL 2 BASIC12.19□□□□□ -0.46
PDE6DO43924 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC12.19□□□□□ -0.46
PDE6DO43924 MMP17-203ENST00000535004 719 ntTSL 3 BASIC12.19□□□□□ -0.46
PDE6DO43924 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
PDE6DO43924 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC12.19□□□□□ -0.46
PDE6DO43924 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC12.19□□□□□ -0.46
PDE6DO43924 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC12.19□□□□□ -0.46
PDE6DO43924 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC12.19□□□□□ -0.46
PDE6DO43924 MIR4313-201ENST00000580760 101 ntBASIC12.19□□□□□ -0.46
PDE6DO43924 NDUFV2-AS1-203ENST00000608008 779 ntBASIC12.19□□□□□ -0.46
PDE6DO43924 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC12.19□□□□□ -0.46
PDE6DO43924 AC004706.3-202ENST00000621574 984 ntBASIC12.19□□□□□ -0.46
PDE6DO43924 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC12.19□□□□□ -0.46
PDE6DO43924 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PDE6DO43924 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.19□□□□□ -0.46
PDE6DO43924 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PDE6DO43924 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.19□□□□□ -0.46
PDE6DO43924 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
PDE6DO43924 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PDE6DO43924 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PDE6DO43924 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PDE6DO43924 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PDE6DO43924 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PDE6DO43924 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PDE6DO43924 AC113367.3-201ENST00000508316 1912 ntBASIC12.19□□□□□ -0.46
PDE6DO43924 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PDE6DO43924 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PDE6DO43924 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PDE6DO43924 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.19□□□□□ -0.46
PDE6DO43924 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.19□□□□□ -0.46
PDE6DO43924 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PDE6DO43924 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PDE6DO43924 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PDE6DO43924 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
PDE6DO43924 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
PDE6DO43924 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC12.18□□□□□ -0.46
PDE6DO43924 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
PDE6DO43924 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PDE6DO43924 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PDE6DO43924 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
PDE6DO43924 AL031595.1-201ENST00000623969 4709 ntBASIC12.18□□□□□ -0.46
PDE6DO43924 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
PDE6DO43924 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PDE6DO43924 ACE3P-201ENST00000423435 1973 ntBASIC12.18□□□□□ -0.46
PDE6DO43924 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PDE6DO43924 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PDE6DO43924 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PDE6DO43924 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.18□□□□□ -0.46
PDE6DO43924 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.18□□□□□ -0.46
PDE6DO43924 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
PDE6DO43924 TERF1P1-201ENST00000311003 1181 ntBASIC12.18□□□□□ -0.46
PDE6DO43924 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PDE6DO43924 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
PDE6DO43924 RNU1-129P-201ENST00000384064 167 ntBASIC12.18□□□□□ -0.46
PDE6DO43924 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
PDE6DO43924 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
PDE6DO43924 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
PDE6DO43924 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
PDE6DO43924 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC12.18□□□□□ -0.46
PDE6DO43924 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC12.18□□□□□ -0.46
PDE6DO43924 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC12.18□□□□□ -0.46
PDE6DO43924 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC12.18□□□□□ -0.46
PDE6DO43924 AC243562.2-201ENST00000561247 970 ntBASIC12.18□□□□□ -0.46
PDE6DO43924 U1.21-201ENST00000580816 167 ntBASIC12.18□□□□□ -0.46
PDE6DO43924 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
PDE6DO43924 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
PDE6DO43924 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC12.18□□□□□ -0.46
PDE6DO43924 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
PDE6DO43924 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
PDE6DO43924 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
PDE6DO43924 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PDE6DO43924 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
PDE6DO43924 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms