Protein–RNA interactions for Protein: O43889

CREB3, Cyclic AMP-responsive element-binding protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3O43889 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CREB3O43889 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.4■□□□□ 0.22
CREB3O43889 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CREB3O43889 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
CREB3O43889 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CREB3O43889 AC100757.3-201ENST00000622361 1406 ntBASIC16.4■□□□□ 0.22
CREB3O43889 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.4■□□□□ 0.22
CREB3O43889 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CREB3O43889 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.4■□□□□ 0.22
CREB3O43889 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CREB3O43889 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CREB3O43889 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.4■□□□□ 0.22
CREB3O43889 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.4■□□□□ 0.22
CREB3O43889 RN7SL618P-201ENST00000477850 296 ntBASIC16.4■□□□□ 0.22
CREB3O43889 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.4■□□□□ 0.22
CREB3O43889 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.4■□□□□ 0.22
CREB3O43889 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.4■□□□□ 0.22
CREB3O43889 AC097359.3-201ENST00000603982 1210 ntBASIC16.4■□□□□ 0.22
CREB3O43889 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CREB3O43889 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CREB3O43889 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.4■□□□□ 0.22
CREB3O43889 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CREB3O43889 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CREB3O43889 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.4■□□□□ 0.22
CREB3O43889 FAM45BP-202ENST00000592932 1624 ntBASIC16.4■□□□□ 0.22
CREB3O43889 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CREB3O43889 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CREB3O43889 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CREB3O43889 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CREB3O43889 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.4■□□□□ 0.22
CREB3O43889 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.4■□□□□ 0.22
CREB3O43889 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CREB3O43889 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CREB3O43889 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CREB3O43889 AC144831.1-201ENST00000573312 2656 ntBASIC16.4■□□□□ 0.22
CREB3O43889 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CREB3O43889 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CREB3O43889 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CREB3O43889 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CREB3O43889 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CREB3O43889 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.39■□□□□ 0.21
CREB3O43889 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CREB3O43889 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.39■□□□□ 0.21
CREB3O43889 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CREB3O43889 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CREB3O43889 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CREB3O43889 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
CREB3O43889 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CREB3O43889 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CREB3O43889 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CREB3O43889 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CREB3O43889 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CREB3O43889 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CREB3O43889 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CREB3O43889 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CREB3O43889 AC055876.3-201ENST00000431496 288 ntBASIC16.39■□□□□ 0.21
CREB3O43889 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CREB3O43889 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.39■□□□□ 0.21
CREB3O43889 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.39■□□□□ 0.21
CREB3O43889 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.39■□□□□ 0.21
CREB3O43889 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CREB3O43889 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.39■□□□□ 0.21
CREB3O43889 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CREB3O43889 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.39■□□□□ 0.21
CREB3O43889 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.39■□□□□ 0.21
CREB3O43889 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.39■□□□□ 0.21
CREB3O43889 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CREB3O43889 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.39■□□□□ 0.21
CREB3O43889 AC138649.4-201ENST00000612222 287 ntBASIC16.39■□□□□ 0.21
CREB3O43889 AL590560.3-201ENST00000623350 461 ntBASIC16.39■□□□□ 0.21
CREB3O43889 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.39■□□□□ 0.21
CREB3O43889 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
CREB3O43889 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.39■□□□□ 0.21
CREB3O43889 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CREB3O43889 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CREB3O43889 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CREB3O43889 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CREB3O43889 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CREB3O43889 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CREB3O43889 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CREB3O43889 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CREB3O43889 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CREB3O43889 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CREB3O43889 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.39■□□□□ 0.21
CREB3O43889 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CREB3O43889 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
CREB3O43889 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.39■□□□□ 0.21
CREB3O43889 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CREB3O43889 AC092384.3-202ENST00000564646 2873 ntBASIC16.39■□□□□ 0.21
CREB3O43889 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CREB3O43889 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CREB3O43889 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CREB3O43889 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.38■□□□□ 0.21
CREB3O43889 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CREB3O43889 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CREB3O43889 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.38■□□□□ 0.21
CREB3O43889 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.38■□□□□ 0.21
CREB3O43889 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CREB3O43889 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CREB3O43889 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms