Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
MID1O15344 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.64■□□□□ 0.09
MID1O15344 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
MID1O15344 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.64■□□□□ 0.09
MID1O15344 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MID1O15344 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.64■□□□□ 0.09
MID1O15344 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
MID1O15344 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
MID1O15344 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
MID1O15344 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MID1O15344 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.64■□□□□ 0.09
MID1O15344 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.64■□□□□ 0.09
MID1O15344 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
MID1O15344 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
MID1O15344 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.64■□□□□ 0.09
MID1O15344 AC092933.1-201ENST00000393644 945 ntBASIC15.64■□□□□ 0.09
MID1O15344 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.64■□□□□ 0.09
MID1O15344 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.64■□□□□ 0.09
MID1O15344 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
MID1O15344 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
MID1O15344 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.64■□□□□ 0.09
MID1O15344 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.64■□□□□ 0.09
MID1O15344 AC106760.1-201ENST00000508690 800 ntBASIC15.64■□□□□ 0.09
MID1O15344 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.64■□□□□ 0.09
MID1O15344 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.64■□□□□ 0.09
MID1O15344 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.64■□□□□ 0.09
MID1O15344 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.64■□□□□ 0.09
MID1O15344 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.64■□□□□ 0.09
MID1O15344 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
MID1O15344 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.64■□□□□ 0.09
MID1O15344 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
MID1O15344 AL033527.4-201ENST00000641026 673 ntBASIC15.64■□□□□ 0.09
MID1O15344 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
MID1O15344 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MID1O15344 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
MID1O15344 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MID1O15344 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MID1O15344 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MID1O15344 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.64■□□□□ 0.09
MID1O15344 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
MID1O15344 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
MID1O15344 AC093525.8-201ENST00000624099 1342 ntBASIC15.64■□□□□ 0.09
MID1O15344 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
MID1O15344 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.64■□□□□ 0.09
MID1O15344 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
MID1O15344 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.64■□□□□ 0.09
MID1O15344 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
MID1O15344 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
MID1O15344 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.64■□□□□ 0.09
MID1O15344 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
MID1O15344 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MID1O15344 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
MID1O15344 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MID1O15344 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
MID1O15344 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MID1O15344 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.63■□□□□ 0.09
MID1O15344 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
MID1O15344 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MID1O15344 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MID1O15344 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
MID1O15344 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MID1O15344 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
MID1O15344 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.63■□□□□ 0.09
MID1O15344 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MID1O15344 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
MID1O15344 AC024909.3-201ENST00000611513 2257 ntBASIC15.63■□□□□ 0.09
MID1O15344 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MID1O15344 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MID1O15344 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.63■□□□□ 0.09
MID1O15344 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MID1O15344 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.63■□□□□ 0.09
MID1O15344 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.63■□□□□ 0.09
MID1O15344 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MID1O15344 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.63■□□□□ 0.09
MID1O15344 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.63■□□□□ 0.09
MID1O15344 FTH1P14-201ENST00000482930 551 ntBASIC15.63■□□□□ 0.09
MID1O15344 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.63■□□□□ 0.09
MID1O15344 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.63■□□□□ 0.09
MID1O15344 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MID1O15344 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MID1O15344 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.63■□□□□ 0.09
MID1O15344 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
MID1O15344 MIR6799-201ENST00000620297 69 ntBASIC15.63■□□□□ 0.09
MID1O15344 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MID1O15344 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
MID1O15344 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
MID1O15344 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.63■□□□□ 0.09
MID1O15344 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MID1O15344 CYP2T1P-202ENST00000641596 2535 ntBASIC15.63■□□□□ 0.09
MID1O15344 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MID1O15344 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
MID1O15344 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
MID1O15344 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.63■□□□□ 0.09
MID1O15344 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MID1O15344 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MID1O15344 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MID1O15344 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MID1O15344 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.63■□□□□ 0.09
MID1O15344 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MID1O15344 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms