Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CFAP99D6REC4 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CFAP99D6REC4 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CFAP99D6REC4 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.71■□□□□ 0.11
CFAP99D6REC4 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.71■□□□□ 0.11
CFAP99D6REC4 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CFAP99D6REC4 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.71■□□□□ 0.11
CFAP99D6REC4 AC093214.1-201ENST00000511688 1107 ntBASIC15.71■□□□□ 0.11
CFAP99D6REC4 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.71■□□□□ 0.11
CFAP99D6REC4 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.71■□□□□ 0.11
CFAP99D6REC4 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CFAP99D6REC4 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.71■□□□□ 0.11
CFAP99D6REC4 AC027796.2-201ENST00000575326 344 ntBASIC15.71■□□□□ 0.11
CFAP99D6REC4 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.71■□□□□ 0.11
CFAP99D6REC4 ACTG1P22-201ENST00000603793 1099 ntBASIC15.71■□□□□ 0.11
CFAP99D6REC4 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.71■□□□□ 0.11
CFAP99D6REC4 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CFAP99D6REC4 AL590560.3-201ENST00000623350 461 ntBASIC15.71■□□□□ 0.11
CFAP99D6REC4 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
CFAP99D6REC4 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CFAP99D6REC4 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CFAP99D6REC4 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.71■□□□□ 0.11
CFAP99D6REC4 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.71■□□□□ 0.11
CFAP99D6REC4 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CFAP99D6REC4 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.71■□□□□ 0.11
CFAP99D6REC4 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CFAP99D6REC4 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CFAP99D6REC4 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
CFAP99D6REC4 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CFAP99D6REC4 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CFAP99D6REC4 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CFAP99D6REC4 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CFAP99D6REC4 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CFAP99D6REC4 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CFAP99D6REC4 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.7■□□□□ 0.1
CFAP99D6REC4 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CFAP99D6REC4 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CFAP99D6REC4 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CFAP99D6REC4 AC018892.3-201ENST00000623986 2499 ntBASIC15.7■□□□□ 0.1
CFAP99D6REC4 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CFAP99D6REC4 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.7■□□□□ 0.1
CFAP99D6REC4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.7■□□□□ 0.1
CFAP99D6REC4 AC136604.1-201ENST00000418535 575 ntBASIC15.7■□□□□ 0.1
CFAP99D6REC4 SDHAP3-202ENST00000515467 728 ntBASIC15.7■□□□□ 0.1
CFAP99D6REC4 RNA5SP421-201ENST00000516864 134 ntBASIC15.7■□□□□ 0.1
CFAP99D6REC4 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.7■□□□□ 0.1
CFAP99D6REC4 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CFAP99D6REC4 HNRNPUP1-201ENST00000554987 333 ntBASIC15.7■□□□□ 0.1
CFAP99D6REC4 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.7■□□□□ 0.1
CFAP99D6REC4 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CFAP99D6REC4 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
CFAP99D6REC4 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CFAP99D6REC4 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CFAP99D6REC4 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CFAP99D6REC4 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CFAP99D6REC4 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CFAP99D6REC4 PCDHA3-202ENST00000532566 4594 ntBASIC15.7■□□□□ 0.1
CFAP99D6REC4 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CFAP99D6REC4 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CFAP99D6REC4 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CFAP99D6REC4 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CFAP99D6REC4 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CFAP99D6REC4 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CFAP99D6REC4 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
CFAP99D6REC4 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CFAP99D6REC4 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CFAP99D6REC4 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CFAP99D6REC4 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CFAP99D6REC4 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CFAP99D6REC4 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.7■□□□□ 0.1
CFAP99D6REC4 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CFAP99D6REC4 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CFAP99D6REC4 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CFAP99D6REC4 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
CFAP99D6REC4 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CFAP99D6REC4 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CFAP99D6REC4 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CFAP99D6REC4 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.69■□□□□ 0.1
CFAP99D6REC4 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CFAP99D6REC4 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CFAP99D6REC4 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CFAP99D6REC4 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CFAP99D6REC4 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
CFAP99D6REC4 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CFAP99D6REC4 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CFAP99D6REC4 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CFAP99D6REC4 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.69■□□□□ 0.1
CFAP99D6REC4 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.69■□□□□ 0.1
CFAP99D6REC4 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.69■□□□□ 0.1
CFAP99D6REC4 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.69■□□□□ 0.1
CFAP99D6REC4 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CFAP99D6REC4 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CFAP99D6REC4 AL512361.1-201ENST00000554200 418 ntBASIC15.69■□□□□ 0.1
CFAP99D6REC4 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.69■□□□□ 0.1
CFAP99D6REC4 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
CFAP99D6REC4 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.69■□□□□ 0.1
CFAP99D6REC4 AC010336.2-201ENST00000564226 506 ntBASIC15.69■□□□□ 0.1
CFAP99D6REC4 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.69■□□□□ 0.1
CFAP99D6REC4 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.69■□□□□ 0.1
CFAP99D6REC4 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms