Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SRRM4A7MD48 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SRRM4A7MD48 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SRRM4A7MD48 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SRRM4A7MD48 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SRRM4A7MD48 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SRRM4A7MD48 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SRRM4A7MD48 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SRRM4A7MD48 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SRRM4A7MD48 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC12.63□□□□□ -0.39
SRRM4A7MD48 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SRRM4A7MD48 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
SRRM4A7MD48 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SRRM4A7MD48 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC12.63□□□□□ -0.39
SRRM4A7MD48 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC12.63□□□□□ -0.39
SRRM4A7MD48 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SRRM4A7MD48 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SRRM4A7MD48 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.63□□□□□ -0.39
SRRM4A7MD48 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SRRM4A7MD48 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SRRM4A7MD48 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SRRM4A7MD48 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SRRM4A7MD48 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SRRM4A7MD48 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SRRM4A7MD48 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC12.63□□□□□ -0.39
SRRM4A7MD48 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC12.63□□□□□ -0.39
SRRM4A7MD48 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC12.63□□□□□ -0.39
SRRM4A7MD48 SATB1-217ENST00000493952 626 ntTSL 3 BASIC12.63□□□□□ -0.39
SRRM4A7MD48 HLA-J-203ENST00000494367 1087 ntBASIC12.63□□□□□ -0.39
SRRM4A7MD48 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SRRM4A7MD48 AC109322.1-201ENST00000524499 1264 ntBASIC12.63□□□□□ -0.39
SRRM4A7MD48 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC12.63□□□□□ -0.39
SRRM4A7MD48 AC069262.1-201ENST00000539058 672 ntBASIC12.63□□□□□ -0.39
SRRM4A7MD48 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC12.63□□□□□ -0.39
SRRM4A7MD48 CALM1-205ENST00000553542 877 ntTSL 5 BASIC12.63□□□□□ -0.39
SRRM4A7MD48 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC12.63□□□□□ -0.39
SRRM4A7MD48 SNHG9-202ENST00000564014 471 ntBASIC12.63□□□□□ -0.39
SRRM4A7MD48 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC12.63□□□□□ -0.39
SRRM4A7MD48 PRR29-209ENST00000582540 967 ntTSL 2 BASIC12.63□□□□□ -0.39
SRRM4A7MD48 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.63□□□□□ -0.39
SRRM4A7MD48 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC12.63□□□□□ -0.39
SRRM4A7MD48 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SRRM4A7MD48 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SRRM4A7MD48 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SRRM4A7MD48 POR-201ENST00000394893 2532 ntTSL 5 BASIC12.63□□□□□ -0.39
SRRM4A7MD48 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC12.63□□□□□ -0.39
SRRM4A7MD48 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SRRM4A7MD48 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC12.63□□□□□ -0.39
SRRM4A7MD48 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SRRM4A7MD48 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SRRM4A7MD48 AC148477.4-201ENST00000613430 1793 ntBASIC12.63□□□□□ -0.39
SRRM4A7MD48 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SRRM4A7MD48 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SRRM4A7MD48 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SRRM4A7MD48 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SRRM4A7MD48 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SRRM4A7MD48 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SRRM4A7MD48 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
SRRM4A7MD48 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC12.63□□□□□ -0.39
SRRM4A7MD48 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SRRM4A7MD48 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SRRM4A7MD48 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.62□□□□□ -0.39
SRRM4A7MD48 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SRRM4A7MD48 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SRRM4A7MD48 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SRRM4A7MD48 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC12.62□□□□□ -0.39
SRRM4A7MD48 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SRRM4A7MD48 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SRRM4A7MD48 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
SRRM4A7MD48 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SRRM4A7MD48 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
SRRM4A7MD48 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC12.62□□□□□ -0.39
SRRM4A7MD48 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
SRRM4A7MD48 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SRRM4A7MD48 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SRRM4A7MD48 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SRRM4A7MD48 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SRRM4A7MD48 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SRRM4A7MD48 AGAP7P-201ENST00000582299 2062 ntBASIC12.62□□□□□ -0.39
SRRM4A7MD48 AGAP14-201ENST00000624701 2060 ntBASIC12.62□□□□□ -0.39
SRRM4A7MD48 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC12.62□□□□□ -0.39
SRRM4A7MD48 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SRRM4A7MD48 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SRRM4A7MD48 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.62□□□□□ -0.39
SRRM4A7MD48 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC12.62□□□□□ -0.39
SRRM4A7MD48 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SRRM4A7MD48 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SRRM4A7MD48 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
SRRM4A7MD48 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SRRM4A7MD48 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC12.62□□□□□ -0.39
SRRM4A7MD48 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SRRM4A7MD48 RPL37AP1-201ENST00000412502 279 ntBASIC12.62□□□□□ -0.39
SRRM4A7MD48 AC074338.1-201ENST00000416825 156 ntBASIC12.62□□□□□ -0.39
SRRM4A7MD48 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12.62□□□□□ -0.39
SRRM4A7MD48 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.62□□□□□ -0.39
SRRM4A7MD48 AC004967.1-201ENST00000453589 447 ntBASIC12.62□□□□□ -0.39
SRRM4A7MD48 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SRRM4A7MD48 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
SRRM4A7MD48 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.62□□□□□ -0.39
SRRM4A7MD48 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms