Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.67□□□□□ -0.22
SHISA3A0PJX4 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHISA3A0PJX4 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHISA3A0PJX4 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHISA3A0PJX4 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.67□□□□□ -0.22
SHISA3A0PJX4 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHISA3A0PJX4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SHISA3A0PJX4 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.67□□□□□ -0.22
SHISA3A0PJX4 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.67□□□□□ -0.22
SHISA3A0PJX4 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 AC084364.1-201ENST00000551967 1556 ntBASIC13.66□□□□□ -0.22
SHISA3A0PJX4 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 AL607033.1-201ENST00000623900 1599 ntBASIC13.66□□□□□ -0.22
SHISA3A0PJX4 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 HCG4B-203ENST00000450128 991 ntBASIC13.66□□□□□ -0.22
SHISA3A0PJX4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 AC098859.1-201ENST00000502915 1238 ntBASIC13.66□□□□□ -0.22
SHISA3A0PJX4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.66□□□□□ -0.22
SHISA3A0PJX4 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 KRT126P-201ENST00000549467 1181 ntBASIC13.66□□□□□ -0.22
SHISA3A0PJX4 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 AC152010.1-201ENST00000415779 2006 ntBASIC13.66□□□□□ -0.22
SHISA3A0PJX4 CYP4F24P-201ENST00000586049 1580 ntBASIC13.66□□□□□ -0.22
SHISA3A0PJX4 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.66□□□□□ -0.22
SHISA3A0PJX4 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHISA3A0PJX4 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SHISA3A0PJX4 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHISA3A0PJX4 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHISA3A0PJX4 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SHISA3A0PJX4 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
SHISA3A0PJX4 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SHISA3A0PJX4 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SHISA3A0PJX4 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SHISA3A0PJX4 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHISA3A0PJX4 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHISA3A0PJX4 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
SHISA3A0PJX4 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.65□□□□□ -0.22
SHISA3A0PJX4 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHISA3A0PJX4 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SHISA3A0PJX4 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHISA3A0PJX4 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.65□□□□□ -0.22
SHISA3A0PJX4 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.65□□□□□ -0.22
SHISA3A0PJX4 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHISA3A0PJX4 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.65□□□□□ -0.22
SHISA3A0PJX4 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SHISA3A0PJX4 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC13.65□□□□□ -0.22
SHISA3A0PJX4 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SHISA3A0PJX4 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SHISA3A0PJX4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SHISA3A0PJX4 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13.65□□□□□ -0.22
SHISA3A0PJX4 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.65□□□□□ -0.22
SHISA3A0PJX4 AC096734.2-201ENST00000562054 433 ntBASIC13.65□□□□□ -0.22
SHISA3A0PJX4 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.65□□□□□ -0.22
SHISA3A0PJX4 AC089987.1-201ENST00000551654 2209 ntBASIC13.65□□□□□ -0.22
SHISA3A0PJX4 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms