Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC015656.1-201ENST00000624209 3578 ntBASIC13.2□□□□□ -0.3
KCNIP3Q9Y2W7 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
KCNIP3Q9Y2W7 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
KCNIP3Q9Y2W7 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
KCNIP3Q9Y2W7 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
KCNIP3Q9Y2W7 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC13.2□□□□□ -0.3
KCNIP3Q9Y2W7 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
KCNIP3Q9Y2W7 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.2□□□□□ -0.3
KCNIP3Q9Y2W7 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.2□□□□□ -0.3
KCNIP3Q9Y2W7 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 ATP5G2P1-201ENST00000433580 426 ntBASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 FAM185BP-201ENST00000443595 716 ntBASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 KRT18P31-201ENST00000506277 1292 ntBASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 FOSL1P1-201ENST00000511041 816 ntBASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 IGHV3-65-201ENST00000523210 341 ntBASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 RIN3-211ENST00000557762 517 ntTSL 3 BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
KCNIP3Q9Y2W7 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.18□□□□□ -0.3
KCNIP3Q9Y2W7 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.18□□□□□ -0.3
KCNIP3Q9Y2W7 AL589702.1-201ENST00000641229 1509 ntBASIC13.18□□□□□ -0.3
KCNIP3Q9Y2W7 AC131212.3-201ENST00000624087 4219 ntBASIC13.18□□□□□ -0.3
KCNIP3Q9Y2W7 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
KCNIP3Q9Y2W7 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KCNIP3Q9Y2W7 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.18□□□□□ -0.3
KCNIP3Q9Y2W7 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.18□□□□□ -0.3
KCNIP3Q9Y2W7 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.18□□□□□ -0.3
KCNIP3Q9Y2W7 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KCNIP3Q9Y2W7 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
KCNIP3Q9Y2W7 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KCNIP3Q9Y2W7 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
KCNIP3Q9Y2W7 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
KCNIP3Q9Y2W7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
KCNIP3Q9Y2W7 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC13.18□□□□□ -0.3
KCNIP3Q9Y2W7 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
KCNIP3Q9Y2W7 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KCNIP3Q9Y2W7 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KCNIP3Q9Y2W7 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.18□□□□□ -0.3
KCNIP3Q9Y2W7 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC13.18□□□□□ -0.3
KCNIP3Q9Y2W7 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC13.18□□□□□ -0.3
KCNIP3Q9Y2W7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC13.18□□□□□ -0.3
KCNIP3Q9Y2W7 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.18□□□□□ -0.3
KCNIP3Q9Y2W7 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
KCNIP3Q9Y2W7 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.18□□□□□ -0.3
KCNIP3Q9Y2W7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC13.18□□□□□ -0.3
KCNIP3Q9Y2W7 AC243562.2-201ENST00000561247 970 ntBASIC13.18□□□□□ -0.3
KCNIP3Q9Y2W7 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
KCNIP3Q9Y2W7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.18□□□□□ -0.3
KCNIP3Q9Y2W7 AC025062.2-201ENST00000605477 670 ntBASIC13.18□□□□□ -0.3
KCNIP3Q9Y2W7 AC092119.3-201ENST00000612618 583 ntBASIC13.18□□□□□ -0.3
KCNIP3Q9Y2W7 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC13.18□□□□□ -0.3
KCNIP3Q9Y2W7 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.18□□□□□ -0.3
KCNIP3Q9Y2W7 AP000550.4-202ENST00000639755 178 ntBASIC13.18□□□□□ -0.3
KCNIP3Q9Y2W7 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
KCNIP3Q9Y2W7 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KCNIP3Q9Y2W7 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms