Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC14.99□□□□□ -0.01
LHX6Q9UPM6 AL121578.1-201ENST00000428051 892 ntBASIC14.99□□□□□ -0.01
LHX6Q9UPM6 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC14.99□□□□□ -0.01
LHX6Q9UPM6 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LHX6Q9UPM6 NUDT4-205ENST00000548662 765 ntTSL 3 BASIC14.99□□□□□ -0.01
LHX6Q9UPM6 AC023310.1-201ENST00000554836 735 ntBASIC14.99□□□□□ -0.01
LHX6Q9UPM6 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.99□□□□□ -0.01
LHX6Q9UPM6 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC14.99□□□□□ -0.01
LHX6Q9UPM6 AC036164.1-201ENST00000570544 333 ntBASIC14.99□□□□□ -0.01
LHX6Q9UPM6 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC14.99□□□□□ -0.01
LHX6Q9UPM6 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.99□□□□□ -0.01
LHX6Q9UPM6 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.99□□□□□ -0.01
LHX6Q9UPM6 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LHX6Q9UPM6 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LHX6Q9UPM6 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
LHX6Q9UPM6 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC14.99□□□□□ -0.01
LHX6Q9UPM6 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC14.99□□□□□ -0.01
LHX6Q9UPM6 RFC1-217ENST00000639695 867 ntTSL 5 BASIC14.99□□□□□ -0.01
LHX6Q9UPM6 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LHX6Q9UPM6 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
LHX6Q9UPM6 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.99□□□□□ -0.01
LHX6Q9UPM6 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LHX6Q9UPM6 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
LHX6Q9UPM6 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.99□□□□□ -0.01
LHX6Q9UPM6 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.99□□□□□ -0.01
LHX6Q9UPM6 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LHX6Q9UPM6 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
LHX6Q9UPM6 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.99□□□□□ -0.01
LHX6Q9UPM6 AL671710.1-201ENST00000610245 2349 ntBASIC14.99□□□□□ -0.01
LHX6Q9UPM6 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LHX6Q9UPM6 AC008033.3-201ENST00000612531 1407 ntBASIC14.99□□□□□ -0.01
LHX6Q9UPM6 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LHX6Q9UPM6 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
LHX6Q9UPM6 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LHX6Q9UPM6 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.99□□□□□ -0.01
LHX6Q9UPM6 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LHX6Q9UPM6 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.99□□□□□ -0.01
LHX6Q9UPM6 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LHX6Q9UPM6 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LHX6Q9UPM6 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LHX6Q9UPM6 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
LHX6Q9UPM6 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.98□□□□□ -0.01
LHX6Q9UPM6 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LHX6Q9UPM6 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
LHX6Q9UPM6 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
LHX6Q9UPM6 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
LHX6Q9UPM6 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
LHX6Q9UPM6 TUBB8P12-201ENST00000308911 1335 ntBASIC14.98□□□□□ -0.01
LHX6Q9UPM6 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.98□□□□□ -0.01
LHX6Q9UPM6 TUBB7P-202ENST00000428444 1305 ntBASIC14.98□□□□□ -0.01
LHX6Q9UPM6 TUBB8P7-204ENST00000567960 1332 ntBASIC14.98□□□□□ -0.01
LHX6Q9UPM6 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
LHX6Q9UPM6 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.98□□□□□ -0.01
LHX6Q9UPM6 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LHX6Q9UPM6 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
LHX6Q9UPM6 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
LHX6Q9UPM6 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LHX6Q9UPM6 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
LHX6Q9UPM6 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.98□□□□□ -0.01
LHX6Q9UPM6 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LHX6Q9UPM6 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LHX6Q9UPM6 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LHX6Q9UPM6 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC14.98□□□□□ -0.01
LHX6Q9UPM6 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.98□□□□□ -0.01
LHX6Q9UPM6 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC14.98□□□□□ -0.01
LHX6Q9UPM6 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC14.98□□□□□ -0.01
LHX6Q9UPM6 FTLP10-202ENST00000505798 471 ntBASIC14.98□□□□□ -0.01
LHX6Q9UPM6 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC14.98□□□□□ -0.01
LHX6Q9UPM6 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.98□□□□□ -0.01
LHX6Q9UPM6 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC14.98□□□□□ -0.01
LHX6Q9UPM6 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.98□□□□□ -0.01
LHX6Q9UPM6 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.98□□□□□ -0.01
LHX6Q9UPM6 EEF1DP1-201ENST00000585891 896 ntBASIC14.98□□□□□ -0.01
LHX6Q9UPM6 AC244669.2-201ENST00000612320 853 ntBASIC14.98□□□□□ -0.01
LHX6Q9UPM6 AP000484.1-201ENST00000620067 1252 ntBASIC14.98□□□□□ -0.01
LHX6Q9UPM6 AC091812.3-201ENST00000621362 345 ntBASIC14.98□□□□□ -0.01
LHX6Q9UPM6 AC148477.9-201ENST00000623974 539 ntBASIC14.98□□□□□ -0.01
LHX6Q9UPM6 CU633904.3-201ENST00000624042 1029 ntBASIC14.98□□□□□ -0.01
LHX6Q9UPM6 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.98□□□□□ -0.01
LHX6Q9UPM6 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.98□□□□□ -0.01
LHX6Q9UPM6 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
LHX6Q9UPM6 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
LHX6Q9UPM6 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LHX6Q9UPM6 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
LHX6Q9UPM6 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.98□□□□□ -0.01
LHX6Q9UPM6 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LHX6Q9UPM6 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
LHX6Q9UPM6 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LHX6Q9UPM6 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LHX6Q9UPM6 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LHX6Q9UPM6 LINC02012-201ENST00000608206 1725 ntBASIC14.97□□□□□ -0.01
LHX6Q9UPM6 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.97□□□□□ -0.01
LHX6Q9UPM6 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LHX6Q9UPM6 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LHX6Q9UPM6 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.97□□□□□ -0.01
LHX6Q9UPM6 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
LHX6Q9UPM6 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.97□□□□□ -0.01
LHX6Q9UPM6 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LHX6Q9UPM6 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.97□□□□□ -0.01
LHX6Q9UPM6 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms