Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
COPS3Q9UNS2 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.05□□□□□ -0.16
COPS3Q9UNS2 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.05□□□□□ -0.16
COPS3Q9UNS2 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
COPS3Q9UNS2 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COPS3Q9UNS2 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.05□□□□□ -0.16
COPS3Q9UNS2 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COPS3Q9UNS2 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COPS3Q9UNS2 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.05□□□□□ -0.16
COPS3Q9UNS2 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COPS3Q9UNS2 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COPS3Q9UNS2 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
COPS3Q9UNS2 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 AC148477.4-201ENST00000613430 1793 ntBASIC14.04□□□□□ -0.16
COPS3Q9UNS2 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 AC023024.2-201ENST00000623561 1993 ntBASIC14.04□□□□□ -0.16
COPS3Q9UNS2 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 TFAMP1-201ENST00000412727 736 ntBASIC14.04□□□□□ -0.16
COPS3Q9UNS2 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 AL450472.2-201ENST00000603663 1156 ntBASIC14.04□□□□□ -0.16
COPS3Q9UNS2 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 AKAP8P1-201ENST00000434743 1349 ntBASIC14.04□□□□□ -0.16
COPS3Q9UNS2 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 CYP4F24P-201ENST00000586049 1580 ntBASIC14.04□□□□□ -0.16
COPS3Q9UNS2 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COPS3Q9UNS2 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
COPS3Q9UNS2 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.03□□□□□ -0.16
COPS3Q9UNS2 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
COPS3Q9UNS2 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
COPS3Q9UNS2 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COPS3Q9UNS2 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.03□□□□□ -0.16
COPS3Q9UNS2 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COPS3Q9UNS2 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.03□□□□□ -0.16
COPS3Q9UNS2 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COPS3Q9UNS2 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COPS3Q9UNS2 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
COPS3Q9UNS2 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.03□□□□□ -0.16
COPS3Q9UNS2 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.03□□□□□ -0.16
COPS3Q9UNS2 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.03□□□□□ -0.16
COPS3Q9UNS2 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COPS3Q9UNS2 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COPS3Q9UNS2 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
COPS3Q9UNS2 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COPS3Q9UNS2 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
COPS3Q9UNS2 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COPS3Q9UNS2 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COPS3Q9UNS2 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.03□□□□□ -0.16
COPS3Q9UNS2 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COPS3Q9UNS2 FAM220BP-201ENST00000377689 816 ntBASIC14.03□□□□□ -0.16
COPS3Q9UNS2 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COPS3Q9UNS2 AL671277.1-201ENST00000429656 993 ntBASIC14.03□□□□□ -0.16
COPS3Q9UNS2 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.03□□□□□ -0.16
COPS3Q9UNS2 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.03□□□□□ -0.16
COPS3Q9UNS2 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.03□□□□□ -0.16
COPS3Q9UNS2 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.03□□□□□ -0.16
COPS3Q9UNS2 AC091812.2-201ENST00000619081 385 ntBASIC14.03□□□□□ -0.16
COPS3Q9UNS2 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
COPS3Q9UNS2 IL9RP2-201ENST00000423948 1312 ntBASIC14.03□□□□□ -0.16
COPS3Q9UNS2 KRT8P37-201ENST00000451609 1420 ntBASIC14.03□□□□□ -0.16
COPS3Q9UNS2 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms