Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNOT11Q9UKZ1 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CNOT11Q9UKZ1 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNOT11Q9UKZ1 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CNOT11Q9UKZ1 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNOT11Q9UKZ1 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CNOT11Q9UKZ1 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNOT11Q9UKZ1 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNOT11Q9UKZ1 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CNOT11Q9UKZ1 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNOT11Q9UKZ1 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.12■□□□□ 0.01
CNOT11Q9UKZ1 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNOT11Q9UKZ1 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNOT11Q9UKZ1 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNOT11Q9UKZ1 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNOT11Q9UKZ1 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.12■□□□□ 0.01
CNOT11Q9UKZ1 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CNOT11Q9UKZ1 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.12■□□□□ 0.01
CNOT11Q9UKZ1 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CNOT11Q9UKZ1 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNOT11Q9UKZ1 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.12■□□□□ 0.01
CNOT11Q9UKZ1 GPS2P2-201ENST00000430745 888 ntBASIC15.12■□□□□ 0.01
CNOT11Q9UKZ1 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.12■□□□□ 0.01
CNOT11Q9UKZ1 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CNOT11Q9UKZ1 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.12■□□□□ 0.01
CNOT11Q9UKZ1 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNOT11Q9UKZ1 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.12■□□□□ 0.01
CNOT11Q9UKZ1 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CNOT11Q9UKZ1 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.12■□□□□ 0.01
CNOT11Q9UKZ1 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.12■□□□□ 0.01
CNOT11Q9UKZ1 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.12■□□□□ 0.01
CNOT11Q9UKZ1 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNOT11Q9UKZ1 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNOT11Q9UKZ1 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CNOT11Q9UKZ1 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CNOT11Q9UKZ1 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNOT11Q9UKZ1 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNOT11Q9UKZ1 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CNOT11Q9UKZ1 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNOT11Q9UKZ1 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
CNOT11Q9UKZ1 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNOT11Q9UKZ1 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNOT11Q9UKZ1 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNOT11Q9UKZ1 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CNOT11Q9UKZ1 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.11■□□□□ 0.01
CNOT11Q9UKZ1 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.11■□□□□ 0.01
CNOT11Q9UKZ1 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CNOT11Q9UKZ1 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.11■□□□□ 0.01
CNOT11Q9UKZ1 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNOT11Q9UKZ1 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.11■□□□□ 0.01
CNOT11Q9UKZ1 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNOT11Q9UKZ1 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CNOT11Q9UKZ1 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CNOT11Q9UKZ1 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNOT11Q9UKZ1 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.11■□□□□ 0.01
CNOT11Q9UKZ1 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNOT11Q9UKZ1 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNOT11Q9UKZ1 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.11■□□□□ 0.01
CNOT11Q9UKZ1 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
CNOT11Q9UKZ1 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNOT11Q9UKZ1 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.11■□□□□ 0.01
CNOT11Q9UKZ1 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNOT11Q9UKZ1 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.11■□□□□ 0.01
CNOT11Q9UKZ1 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CNOT11Q9UKZ1 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.11■□□□□ 0.01
CNOT11Q9UKZ1 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CNOT11Q9UKZ1 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.11■□□□□ 0.01
CNOT11Q9UKZ1 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.11■□□□□ 0.01
CNOT11Q9UKZ1 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CNOT11Q9UKZ1 PRYP6-201ENST00000514804 343 ntBASIC15.11■□□□□ 0.01
CNOT11Q9UKZ1 AC105233.2-201ENST00000523697 349 ntBASIC15.11■□□□□ 0.01
CNOT11Q9UKZ1 AC109322.1-201ENST00000524499 1264 ntBASIC15.11■□□□□ 0.01
CNOT11Q9UKZ1 AF228730.5-201ENST00000530288 346 ntBASIC15.11■□□□□ 0.01
CNOT11Q9UKZ1 SLC25A39P2-201ENST00000537614 270 ntBASIC15.11■□□□□ 0.01
CNOT11Q9UKZ1 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.11■□□□□ 0.01
CNOT11Q9UKZ1 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNOT11Q9UKZ1 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNOT11Q9UKZ1 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.11■□□□□ 0.01
CNOT11Q9UKZ1 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.11■□□□□ 0.01
CNOT11Q9UKZ1 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNOT11Q9UKZ1 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.11■□□□□ 0.01
CNOT11Q9UKZ1 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.11■□□□□ 0.01
CNOT11Q9UKZ1 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNOT11Q9UKZ1 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CNOT11Q9UKZ1 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 AC005840.4-201ENST00000541242 2494 ntBASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 BEND3P1-201ENST00000421591 1944 ntBASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.1■□□□□ 0.01
CNOT11Q9UKZ1 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms