Protein–RNA interactions for Protein: Q9UI42

CPA4, Carboxypeptidase A4, humanhuman

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4Q9UI42 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPA4Q9UI42 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
CPA4Q9UI42 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPA4Q9UI42 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CPA4Q9UI42 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPA4Q9UI42 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPA4Q9UI42 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPA4Q9UI42 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPA4Q9UI42 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC17.65■□□□□ 0.42
CPA4Q9UI42 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPA4Q9UI42 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPA4Q9UI42 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPA4Q9UI42 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPA4Q9UI42 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPA4Q9UI42 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPA4Q9UI42 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPA4Q9UI42 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC17.65■□□□□ 0.42
CPA4Q9UI42 AC100850.1-201ENST00000506768 649 ntBASIC17.65■□□□□ 0.42
CPA4Q9UI42 AL391280.1-201ENST00000506969 1062 ntBASIC17.65■□□□□ 0.42
CPA4Q9UI42 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPA4Q9UI42 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC17.65■□□□□ 0.42
CPA4Q9UI42 AP003171.2-201ENST00000528208 925 ntBASIC17.65■□□□□ 0.42
CPA4Q9UI42 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC17.65■□□□□ 0.42
CPA4Q9UI42 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC17.65■□□□□ 0.42
CPA4Q9UI42 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC17.65■□□□□ 0.42
CPA4Q9UI42 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.65■□□□□ 0.42
CPA4Q9UI42 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPA4Q9UI42 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPA4Q9UI42 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPA4Q9UI42 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CPA4Q9UI42 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPA4Q9UI42 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.65■□□□□ 0.42
CPA4Q9UI42 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPA4Q9UI42 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.65■□□□□ 0.42
CPA4Q9UI42 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPA4Q9UI42 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CPA4Q9UI42 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.65■□□□□ 0.42
CPA4Q9UI42 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CPA4Q9UI42 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.65■□□□□ 0.42
CPA4Q9UI42 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPA4Q9UI42 AC011477.6-201ENST00000604980 1927 ntBASIC17.64■□□□□ 0.42
CPA4Q9UI42 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.42
CPA4Q9UI42 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPA4Q9UI42 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPA4Q9UI42 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.64■□□□□ 0.41
CPA4Q9UI42 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPA4Q9UI42 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPA4Q9UI42 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPA4Q9UI42 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPA4Q9UI42 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.64■□□□□ 0.41
CPA4Q9UI42 AL008707.1-201ENST00000422498 534 ntBASIC17.64■□□□□ 0.41
CPA4Q9UI42 AC069218.1-201ENST00000435269 762 ntBASIC17.64■□□□□ 0.41
CPA4Q9UI42 AC021723.1-201ENST00000486306 515 ntBASIC17.64■□□□□ 0.41
CPA4Q9UI42 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC17.64■□□□□ 0.41
CPA4Q9UI42 AC024681.1-201ENST00000521917 487 ntBASIC17.64■□□□□ 0.41
CPA4Q9UI42 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CPA4Q9UI42 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC17.64■□□□□ 0.41
CPA4Q9UI42 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC17.64■□□□□ 0.41
CPA4Q9UI42 ZACNP1-201ENST00000612259 710 ntBASIC17.64■□□□□ 0.41
CPA4Q9UI42 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPA4Q9UI42 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPA4Q9UI42 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPA4Q9UI42 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPA4Q9UI42 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPA4Q9UI42 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPA4Q9UI42 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPA4Q9UI42 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.64■□□□□ 0.41
CPA4Q9UI42 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.63■□□□□ 0.41
CPA4Q9UI42 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.63■□□□□ 0.41
CPA4Q9UI42 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPA4Q9UI42 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPA4Q9UI42 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPA4Q9UI42 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.63■□□□□ 0.41
CPA4Q9UI42 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPA4Q9UI42 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPA4Q9UI42 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CPA4Q9UI42 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.63■□□□□ 0.41
CPA4Q9UI42 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPA4Q9UI42 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPA4Q9UI42 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPA4Q9UI42 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CPA4Q9UI42 AC012618.1-201ENST00000461223 412 ntBASIC17.63■□□□□ 0.41
CPA4Q9UI42 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC17.63■□□□□ 0.41
CPA4Q9UI42 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.63■□□□□ 0.41
CPA4Q9UI42 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPA4Q9UI42 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.63■□□□□ 0.41
CPA4Q9UI42 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CPA4Q9UI42 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPA4Q9UI42 AC006480.2-201ENST00000609770 1337 ntBASIC17.63■□□□□ 0.41
CPA4Q9UI42 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CPA4Q9UI42 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPA4Q9UI42 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CPA4Q9UI42 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CPA4Q9UI42 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPA4Q9UI42 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CPA4Q9UI42 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CPA4Q9UI42 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPA4Q9UI42 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
CPA4Q9UI42 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPA4Q9UI42 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms