Protein–RNA interactions for Protein: Q9UHC6

CNTNAP2, Contactin-associated protein-like 2, humanhuman

Predictions only

Length 1,331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP2Q9UHC6 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP2Q9UHC6 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
CNTNAP2Q9UHC6 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP2Q9UHC6 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP2Q9UHC6 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP2Q9UHC6 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.03■□□□□ 0.32
CNTNAP2Q9UHC6 MIR658-201ENST00000385210 100 ntBASIC17.03■□□□□ 0.32
CNTNAP2Q9UHC6 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP2Q9UHC6 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP2Q9UHC6 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CNTNAP2Q9UHC6 AC022210.1-201ENST00000449856 793 ntBASIC17.03■□□□□ 0.32
CNTNAP2Q9UHC6 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.03■□□□□ 0.32
CNTNAP2Q9UHC6 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.03■□□□□ 0.32
CNTNAP2Q9UHC6 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.03■□□□□ 0.32
CNTNAP2Q9UHC6 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
CNTNAP2Q9UHC6 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP2Q9UHC6 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.03■□□□□ 0.32
CNTNAP2Q9UHC6 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.03■□□□□ 0.32
CNTNAP2Q9UHC6 MIR5189-201ENST00000577370 114 ntBASIC17.03■□□□□ 0.32
CNTNAP2Q9UHC6 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CNTNAP2Q9UHC6 AC233724.13-201ENST00000598383 410 ntBASIC17.03■□□□□ 0.32
CNTNAP2Q9UHC6 AC107373.2-201ENST00000607735 490 ntBASIC17.03■□□□□ 0.32
CNTNAP2Q9UHC6 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.03■□□□□ 0.32
CNTNAP2Q9UHC6 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CNTNAP2Q9UHC6 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.03■□□□□ 0.32
CNTNAP2Q9UHC6 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP2Q9UHC6 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP2Q9UHC6 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP2Q9UHC6 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP2Q9UHC6 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP2Q9UHC6 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP2Q9UHC6 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CNTNAP2Q9UHC6 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CNTNAP2Q9UHC6 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP2Q9UHC6 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP2Q9UHC6 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP2Q9UHC6 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP2Q9UHC6 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CNTNAP2Q9UHC6 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNTNAP2Q9UHC6 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CNTNAP2Q9UHC6 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CNTNAP2Q9UHC6 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.02■□□□□ 0.32
CNTNAP2Q9UHC6 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNTNAP2Q9UHC6 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.02■□□□□ 0.32
CNTNAP2Q9UHC6 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.02■□□□□ 0.32
CNTNAP2Q9UHC6 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CNTNAP2Q9UHC6 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CNTNAP2Q9UHC6 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNTNAP2Q9UHC6 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CNTNAP2Q9UHC6 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.02■□□□□ 0.32
CNTNAP2Q9UHC6 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.02■□□□□ 0.32
CNTNAP2Q9UHC6 GAPDHP40-201ENST00000505218 1006 ntBASIC17.02■□□□□ 0.32
CNTNAP2Q9UHC6 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CNTNAP2Q9UHC6 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.02■□□□□ 0.32
CNTNAP2Q9UHC6 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.02■□□□□ 0.32
CNTNAP2Q9UHC6 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.02■□□□□ 0.32
CNTNAP2Q9UHC6 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.02■□□□□ 0.32
CNTNAP2Q9UHC6 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.02■□□□□ 0.32
CNTNAP2Q9UHC6 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.02■□□□□ 0.32
CNTNAP2Q9UHC6 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNTNAP2Q9UHC6 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
CNTNAP2Q9UHC6 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CNTNAP2Q9UHC6 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNTNAP2Q9UHC6 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNTNAP2Q9UHC6 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.02■□□□□ 0.32
CNTNAP2Q9UHC6 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CNTNAP2Q9UHC6 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNTNAP2Q9UHC6 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNTNAP2Q9UHC6 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CNTNAP2Q9UHC6 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNTNAP2Q9UHC6 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CNTNAP2Q9UHC6 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CNTNAP2Q9UHC6 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
CNTNAP2Q9UHC6 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.02■□□□□ 0.31
CNTNAP2Q9UHC6 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CNTNAP2Q9UHC6 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CNTNAP2Q9UHC6 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.02■□□□□ 0.31
CNTNAP2Q9UHC6 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
CNTNAP2Q9UHC6 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.02■□□□□ 0.31
CNTNAP2Q9UHC6 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.02■□□□□ 0.31
CNTNAP2Q9UHC6 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CNTNAP2Q9UHC6 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CNTNAP2Q9UHC6 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CNTNAP2Q9UHC6 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CNTNAP2Q9UHC6 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CNTNAP2Q9UHC6 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CNTNAP2Q9UHC6 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CNTNAP2Q9UHC6 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CNTNAP2Q9UHC6 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CNTNAP2Q9UHC6 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CNTNAP2Q9UHC6 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP2Q9UHC6 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP2Q9UHC6 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP2Q9UHC6 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP2Q9UHC6 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP2Q9UHC6 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.01■□□□□ 0.31
CNTNAP2Q9UHC6 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.01■□□□□ 0.31
CNTNAP2Q9UHC6 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP2Q9UHC6 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CNTNAP2Q9UHC6 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms