Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.75□□□□□ -0.21
PCDHB16Q9NRJ7 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 AC087481.3-201ENST00000602886 1894 ntBASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 ZNF259P1-201ENST00000407656 1365 ntBASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 IGHV3-22-201ENST00000520721 359 ntBASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 AC243562.2-201ENST00000561247 970 ntBASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 Z83851.2-201ENST00000609564 659 ntBASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 BX640515.1-201ENST00000617215 977 ntBASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCDHB16Q9NRJ7 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
PCDHB16Q9NRJ7 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCDHB16Q9NRJ7 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCDHB16Q9NRJ7 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
PCDHB16Q9NRJ7 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PCDHB16Q9NRJ7 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PCDHB16Q9NRJ7 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCDHB16Q9NRJ7 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCDHB16Q9NRJ7 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PCDHB16Q9NRJ7 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
PCDHB16Q9NRJ7 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.73□□□□□ -0.21
PCDHB16Q9NRJ7 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PCDHB16Q9NRJ7 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
PCDHB16Q9NRJ7 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.73□□□□□ -0.21
PCDHB16Q9NRJ7 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.73□□□□□ -0.21
PCDHB16Q9NRJ7 BCAR1-209ENST00000546196 1340 ntBASIC13.73□□□□□ -0.21
PCDHB16Q9NRJ7 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PCDHB16Q9NRJ7 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCDHB16Q9NRJ7 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCDHB16Q9NRJ7 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
PCDHB16Q9NRJ7 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCDHB16Q9NRJ7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCDHB16Q9NRJ7 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCDHB16Q9NRJ7 CSF3-203ENST00000394148 622 ntTSL 3 BASIC13.73□□□□□ -0.21
PCDHB16Q9NRJ7 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCDHB16Q9NRJ7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PCDHB16Q9NRJ7 AL590627.1-203ENST00000421194 1026 ntBASIC13.73□□□□□ -0.21
PCDHB16Q9NRJ7 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.73□□□□□ -0.21
PCDHB16Q9NRJ7 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
PCDHB16Q9NRJ7 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.73□□□□□ -0.21
PCDHB16Q9NRJ7 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.73□□□□□ -0.21
PCDHB16Q9NRJ7 AC098859.1-201ENST00000502915 1238 ntBASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms